RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 DNAAF1Q8NEP3 725 aa3.69□□□□□ -1.82
SMAD4-207ENST00000589076 FAR1Q8WVX9 515 aa3.69□□□□□ -1.82
SMAD4-207ENST00000589076 DNASE2BQ8WZ79 361 aa3.69□□□□□ -1.82
SMAD4-207ENST00000589076 CENPIQ92674 756 aaPredicted RBP3.69□□□□□ -1.82
SMAD4-207ENST00000589076 KAT2AQ92830 837 aa3.69□□□□□ -1.82
SMAD4-207ENST00000589076 SAAL1Q96ER3 474 aa3.69□□□□□ -1.82
SMAD4-207ENST00000589076 SF3B5Q9BWJ5 86 aaKnown RBP3.69□□□□□ -1.82
SMAD4-207ENST00000589076 ZNF304Q9HCX3 659 aa3.69□□□□□ -1.82
SMAD4-207ENST00000589076 PAPOLBQ9NRJ5 636 aaKnown RBP3.69□□□□□ -1.82
SMAD4-207ENST00000589076 ATP8A2Q9NTI2 1148 aa3.69□□□□□ -1.82
SMAD4-207ENST00000589076 MAP3K20Q9NYL2 800 aaKnown RBP3.69□□□□□ -1.82
SMAD4-207ENST00000589076 MPP6Q9NZW5 540 aa3.69□□□□□ -1.82
SMAD4-207ENST00000589076 TBC1D14Q9P2M4 693 aa3.69□□□□□ -1.82
SMAD4-207ENST00000589076 UTS2RQ9UKP6 389 aa3.69□□□□□ -1.82
SMAD4-207ENST00000589076 KAT6BQ8WYB5 2073 aa3.69□□□□□ -1.82
SMAD4-207ENST00000589076 TTBK1Q5TCY1 1321 aaPredicted RBP3.69□□□□□ -1.82
SMAD4-207ENST00000589076 KIR2DS5A0A0G2JLQ3 304 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 ARHGAP10A1A4S6 786 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 TARSL2A2RTX5 802 aaKnown RBP3.68□□□□□ -1.82
SMAD4-207ENST00000589076 FOXO6A8MYZ6 492 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 KIR2DS3K7RE56 304 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 NDUFB8O95169 186 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 DDAH2O95865 285 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 ADAP00813 363 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 WNT1P04628 370 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 HSPA1AP0DMV8 641 aaKnown RBP3.68□□□□□ -1.82
SMAD4-207ENST00000589076 HSPA1BP0DMV9 641 aaKnown RBP3.68□□□□□ -1.82
SMAD4-207ENST00000589076 FGF3P11487 239 aaPredicted RBP3.68□□□□□ -1.82
SMAD4-207ENST00000589076 CHMP24386 653 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 EPHA8P29322 1005 aaPredicted RBP3.68□□□□□ -1.82
SMAD4-207ENST00000589076 SLC16A2P36021 539 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 ENTPD1P49961 510 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 CCR9P51686 369 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 CYP4A11Q02928 519 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 PPATQ06203 517 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 PMPCAQ10713 525 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 NFATC4Q14934 902 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 RPE65Q16518 533 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 TSTQ16762 297 aaKnown RBP3.68□□□□□ -1.82
SMAD4-207ENST00000589076 EDRF1Q3B7T1 1238 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 FBXO43Q4G163 708 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 MZT2BQ6NZ67 158 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 CLEC4GQ6UXB4 293 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 ATF7IPQ6VMQ6 1270 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 TMTC3Q6ZXV5 915 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 WDR5BQ86VZ2 330 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 NR2C2APQ86WQ0 139 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 CCDC25Q86WR0 208 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 IQCF1Q8N6M8 205 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 SLC44A5Q8NCS7 719 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 ZMIZ2Q8NF64 920 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 KIF1BPQ96EK5 621 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 WBP1Q96G27 269 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 MED30Q96HR3 178 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 CAMK1GQ96NX5 476 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 NR1H4Q96RI1 486 aaPredicted RBP3.68□□□□□ -1.82
SMAD4-207ENST00000589076 RBM38Q9H0Z9 239 aaKnown RBP3.68□□□□□ -1.82
SMAD4-207ENST00000589076 SLC32A1Q9H598 525 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 ACTR5Q9H9F9 607 aaPredicted RBP3.68□□□□□ -1.82
SMAD4-207ENST00000589076 BABAM1Q9NWV8 329 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 ORC3Q9UBD5 711 aaPredicted RBP3.68□□□□□ -1.82
SMAD4-207ENST00000589076 NLKQ9UBE8 527 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 PEMTQ9UBM1 199 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 AGO2Q9UKV8 859 aaKnown RBP3.68□□□□□ -1.82
SMAD4-207ENST00000589076 SARDHQ9UL12 918 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 CAMK2AQ9UQM7 478 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 LAS1LQ9Y4W2 734 aaKnown RBP3.68□□□□□ -1.82
SMAD4-207ENST00000589076 KDM3AQ9Y4C1 1321 aa3.68□□□□□ -1.82
SMAD4-207ENST00000589076 UNC79Q9P2D8 2635 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 TRBV5-3A0A0A0MS03 114 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 TRBV5-7A0A0A0MS05 114 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 FAM157AC9JC47 383 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 RHODO00212 210 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 RNMTO43148 476 aaKnown RBP3.67□□□□□ -1.82
SMAD4-207ENST00000589076 USO1O60763 962 aaKnown RBP3.67□□□□□ -1.82
SMAD4-207ENST00000589076 TMCC1O94876 653 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 TNFRSF1BP20333 461 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 YWHAQP27348 245 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 ABCD1P33897 745 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 MLH1P40692 756 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 PTPN9P43378 593 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 NAP1L1P55209 391 aaKnown RBP3.67□□□□□ -1.82
SMAD4-207ENST00000589076 YWHAZP63104 245 aaKnown RBP3.67□□□□□ -1.82
SMAD4-207ENST00000589076 KRT32Q14532 448 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 SLC9B1Q4ZJI4 515 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 ALG10Q5BKT4 473 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 ALG10BQ5I7T1 473 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 CCDC30Q5VVM6 783 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 HAUS3Q68CZ6 603 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 TMEM81Q6P7N7 255 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 NEK10Q6ZWH5 1172 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 CPLX4Q7Z7G2 160 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 TADA2BQ86TJ2 420 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 TMC8Q8IU68 726 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 SPATA2LQ8IUW3 424 aaPredicted RBP3.67□□□□□ -1.82
SMAD4-207ENST00000589076 PLD5Q8N7P1 536 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 WIPF2Q8TF74 440 aaPredicted RBP3.67□□□□□ -1.82
SMAD4-207ENST00000589076 TMEM170AQ8WVE7 144 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 NUDCD2Q8WVJ2 157 aa3.67□□□□□ -1.82
SMAD4-207ENST00000589076 ASB5Q8WWX0 329 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms