RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 HEPHQ9BQS7 1158 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 IER2Q9BTL4 223 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 CPEB1Q9BZB8 566 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 DLGAP2Q9P1A6 1054 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 IL36AQ9UHA7 158 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 FARP1Q9Y4F1 1045 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 WASF2Q9Y6W5 498 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 TTC28Q96AY4 2481 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 RAD51CO43502 376 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 PI15O43692 258 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 CTSLP07711 333 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 SERPINF2P08697 491 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 CD86P42081 329 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 CLCN5P51795 746 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 COPAP53621 1224 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 SKOR1P84550 965 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 RAD51Q06609 339 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 PTK6Q13882 451 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 TRIP13Q15645 432 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 KLHDC8BQ8IXV7 354 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 PIAS4Q8N2W9 510 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 SPEM1Q8N4L4 309 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 NOA1Q8NC60 698 aaKnown RBP16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 OR2T3Q8NH03 318 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 SPATA22Q8NHS9 363 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 TADA1Q96BN2 335 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 ERLEC1Q96DZ1 483 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 LRIG1Q96JA1 1093 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 RBM15Q96T37 977 aaKnown RBP eCLIP16.09■□□□□ 0.172e-11■■■■□ 25.1
CSNK1D-212ENST00000580061 RSPH9Q9H1X1 276 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 ZDHHC6Q9H6R6 413 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 FBRSQ9HAH7 460 aa16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 POLR3BQ9NW08 1133 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-212ENST00000580061 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 FAM187AA6NFU0 413 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 F5H423 210 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 TNFRSF10AO00220 468 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 MT-CYBP00156 380 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 VPS41P49754 854 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 MRPS25P82663 173 aaKnown RBP16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 MTAPQ13126 283 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 PRPSAP1Q14558 356 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 GRM3Q14832 879 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 SLC14A2Q15849 920 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 ARSIQ5FYB1 569 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 FAXCQ5TGI0 409 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 C8orf74Q6P047 294 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 BMP8AQ7Z5Y6 402 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 DSG4Q86SJ6 1040 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 TAB3Q8N5C8 712 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 LRRN4CLQ8ND94 238 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 CCHCR1Q8TD31 782 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 OXNAD1Q96HP4 312 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 PPP1R2P1Q96PQ5 205 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 TUBGCP5Q96RT8 1024 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 TRIM51Q9BSJ1 452 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 COL25A1Q9BXS0 654 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 EPHX3Q9H6B9 360 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 ATP13A3Q9H7F0 1226 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 ETNK1Q9HBU6 452 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 RAB6BQ9NRW1 208 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 VPS45Q9NRW7 570 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 C2orf42Q9NWW7 574 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 PPM1HQ9ULR3 514 aa16.08■□□□□ 0.16
CSNK1D-212ENST00000580061 SOCS5O75159 536 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 LEFTY1O75610 366 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 ANXA9O76027 345 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 PIGNO95427 931 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 PRNPP04156 253 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 C7P10643 843 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 SERPINA4P29622 427 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 FDFT1P37268 417 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 DGKEP52429 567 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 SATB1Q01826 763 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 BCL2L1Q07817 233 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 GPS1Q13098 491 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 SEMA5AQ13591 1074 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 KDELC1Q6UW63 502 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 GDPD4Q6W3E5 623 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 CAMK1DQ8IU85 385 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 MMAAQ8IVH4 418 aaKnown RBP16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 TMIEQ8NEW7 156 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 PIP4K2CQ8TBX8 421 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 GRIN3AQ8TCU5 1115 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 PBXIP1Q96AQ6 731 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 LRRC1Q9BTT6 524 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 MLPHQ9BV36 600 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 OSBPL1AQ9BXW6 950 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 MKRN2Q9H000 416 aaKnown RBP16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 POLMQ9NP87 494 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 UBP1Q9NZI7 540 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 ASIC3Q9UHC3 531 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 FAM153AQ9UHL3 310 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 SARDHQ9UL12 918 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 AAR2Q9Y312 384 aaKnown RBP16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 PCDHGC4Q9Y5F7 938 aa16.07■□□□□ 0.16
CSNK1D-212ENST00000580061 TRAFD1O14545 582 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-212ENST00000580061 RNASEH1O60930 286 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-212ENST00000580061 SLC34A2O95436 690 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms