RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 PPP2CAP67775 309 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 ZNF805Q5CZA5 627 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 PARS2Q7L3T8 475 aaKnown RBP22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 KIAA1328Q86T90 577 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 VSIG1Q86XK7 387 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 PQLC3Q8N755 202 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 CALR3Q96L12 384 aaKnown RBP22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 ORAI3Q9BRQ5 295 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 GOLPH3Q9H4A6 298 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 PREBQ9HCU5 417 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 SEPT3Q9UH03 358 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 MAP1BP46821 2468 aaKnown RBP22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 PCDH15Q96QU1 1955 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 A0A1W2PPC4 97 aa22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 C3orf70A6NLC5 250 aaPredicted RBP22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 INSIG1O15503 277 aa22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 PJA2O43164 708 aa22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 MAFKO60675 156 aa22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 ADRB1P08588 477 aa22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 LBRQ14739 615 aaKnown RBP22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 ODF2Q5BJF6 829 aa22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 GDPD4Q6W3E5 623 aa22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 LRRC49Q8IUZ0 686 aa22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 TSEN2Q8NCE0 465 aaKnown RBP22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 TPCN2Q8NHX9 752 aa22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 KLHL32Q96NJ5 620 aa22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 RNF157Q96PX1 679 aa22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 CPEB1Q9BZB8 566 aaKnown RBP22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 LACRTQ9GZZ8 138 aa22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 FSCN3Q9NQT6 498 aa22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 SLCO1B1Q9Y6L6 691 aa22.48■■□□□ 1.19
SMARCD2-206ENST00000577990 SHROOM3Q8TF72 1996 aa22.47■■□□□ 1.19
SMARCD2-206ENST00000577990 C16orf96A6NNT2 1141 aa22.47■■□□□ 1.19
SMARCD2-206ENST00000577990 ADRB3P13945 408 aa22.47■■□□□ 1.19
SMARCD2-206ENST00000577990 ENGP17813 658 aa22.47■■□□□ 1.19
SMARCD2-206ENST00000577990 RGRP47804 291 aa22.47■■□□□ 1.19
SMARCD2-206ENST00000577990 CSNK1DP48730 415 aa22.47■■□□□ 1.19
SMARCD2-206ENST00000577990 GALNT2Q10471 571 aa22.47■■□□□ 1.19
SMARCD2-206ENST00000577990 FBXL19Q6PCT2 694 aa22.47■■□□□ 1.19
SMARCD2-206ENST00000577990 DAAM2Q86T65 1068 aa22.47■■□□□ 1.19
SMARCD2-206ENST00000577990 TRIM69Q86WT6 500 aa22.47■■□□□ 1.19
SMARCD2-206ENST00000577990 TXLNBQ8N3L3 684 aa22.47■■□□□ 1.19
SMARCD2-206ENST00000577990 NSMCE1Q8WV22 266 aa22.47■■□□□ 1.19
SMARCD2-206ENST00000577990 DESI2Q9BSY9 194 aa22.47■■□□□ 1.19
SMARCD2-206ENST00000577990 TM9SF3Q9HD45 589 aa22.47■■□□□ 1.19
SMARCD2-206ENST00000577990 DUSP10Q9Y6W6 482 aa22.47■■□□□ 1.19
SMARCD2-206ENST00000577990 PLXNA2O75051 1894 aa22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 LATO43561 262 aa22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 PEX11BO96011 259 aa22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 SYPP08247 313 aa22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 GARSP41250 739 aaKnown RBP22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 RENBPP51606 427 aa22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 AFF3P51826 1226 aaKnown RBP22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 NAP1L1P55209 391 aaKnown RBP22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 SLC10A7Q0GE19 358 aa22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 ZNF235Q14590 738 aa22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 GRM3Q14832 879 aa22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 NEK5Q6P3R8 708 aa22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 SRLQ86TD4 932 aa22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 PRPF39Q86UA1 669 aaKnown RBP22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 RNF25Q96BH1 459 aaPredicted RBP22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 PSKH2Q96QS6 385 aa22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 MAK16Q9BXY0 300 aaKnown RBP22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 EBF2Q9HAK2 575 aa22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 TMEM9BQ9NQ34 198 aa22.46■■□□□ 1.19
SMARCD2-206ENST00000577990 ARHGAP33O14559 1287 aa22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 AP1G1O43747 822 aa22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 RNGTTO60942 597 aaKnown RBP22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 MAP3K6O95382 1288 aa22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 PIGNO95427 931 aa22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 NUDT1P36639 197 aa22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 HSPA9P38646 679 aaKnown RBP22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 ATXN3P54252 364 aaPredicted RBP22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 GBE1Q04446 702 aa22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 NSUN2Q08J23 767 aaKnown RBP eCLIP22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 BBS5Q8N3I7 341 aa22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 RAB7BQ96AH8 199 aa22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 SLC6A18Q96N87 628 aa22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 TUBGCP5Q96RT8 1024 aa22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 GRPEL1Q9HAV7 217 aa22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 DKK3Q9UBP4 350 aa22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 FADS3Q9Y5Q0 445 aa22.45■■□□□ 1.18
SMARCD2-206ENST00000577990 A0A1W2PQU0 124 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 CDX4O14627 284 aaPredicted RBP22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 APOL1O14791 398 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 MUSKO15146 869 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 PCDH8O95206 1070 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 MX2P20592 715 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 MAT2AP31153 395 aaKnown RBP22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 ABL2P42684 1182 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 MAPK8P45983 427 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 GRIA4P48058 902 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 RACK1P63244 317 aaKnown RBP22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 GRIK2Q13002 908 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 TEAD4Q15561 434 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 IFI16Q16666 785 aaKnown RBP22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 SLC9A4Q6AI14 798 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 MFSD7Q6UXD7 560 aa22.44■■□□□ 1.18
SMARCD2-206ENST00000577990 HORMAD1Q86X24 394 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms