RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 POMKQ9H5K3 350 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 AAR2Q9Y312 384 aaKnown RBP15.81■□□□□ 0.12
NUP88-207ENST00000573584 RALGAPA2Q2PPJ7 1873 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 NUP205Q92621 2012 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 E7ENX8 843 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 SMPD1P17405 629 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 IGFBP6P24592 240 aaPredicted RBP15.81■□□□□ 0.12
NUP88-207ENST00000573584 POLD2P49005 469 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 NR1H2P55055 460 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 STX5Q13190 355 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 PDAP1Q13442 181 aaKnown RBP15.81■□□□□ 0.12
NUP88-207ENST00000573584 XKR4Q5GH76 650 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 CNSTQ6PJW8 725 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 PTAR1Q7Z6K3 402 aaPredicted RBP15.81■□□□□ 0.12
NUP88-207ENST00000573584 IPMKQ8NFU5 416 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 HEXDCQ8WVB3 486 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 DPF3Q92784 378 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 PGAP3Q96FM1 320 aaPredicted RBP15.81■□□□□ 0.12
NUP88-207ENST00000573584 SLC2A11Q9BYW1 496 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 TRPC7Q9HCX4 862 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 CNGB3Q9NQW8 809 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 NEMP2A6NFY4 417 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 TMCC1O94876 653 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 ARCN1P48444 511 aaKnown RBP15.81■□□□□ 0.12
NUP88-207ENST00000573584 TAS2R39P59534 338 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 PPIL2Q13356 520 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 PCBP1Q15365 356 aaKnown RBP eCLIP15.81■□□□□ 0.12
NUP88-207ENST00000573584 AMIGO2Q86SJ2 522 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 PELI3Q8N2H9 469 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 ARRDC4Q8NCT1 418 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 TMEM40Q8WWA1 233 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 SMOQ99835 787 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 KATNBL1Q9H079 304 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 COQ10BQ9H8M1 238 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 CRTAC1Q9NQ79 661 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 PHF24Q9UPV7 400 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 DFFAO00273 331 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 CSPG5O95196 566 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 SNAI1O95863 264 aaPredicted RBP15.8■□□□□ 0.12
NUP88-207ENST00000573584 F9P00740 461 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 ATP5F1P24539 256 aaPredicted RBP15.8■□□□□ 0.12
NUP88-207ENST00000573584 AXLP30530 894 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 INHBCP55103 352 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 CYTH1Q15438 398 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 OR6J1Q8NGC5 347 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 SPPL2BQ8TCT7 592 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 UNC93B1Q9H1C4 597 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 MRPL40Q9NQ50 206 aaKnown RBP15.8■□□□□ 0.12
NUP88-207ENST00000573584 SUCOQ9UBS9 1254 aaKnown RBP15.8■□□□□ 0.12
NUP88-207ENST00000573584 SLC2A6Q9UGQ3 507 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 C7orf72A4D263 438 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 GABRDO14764 452 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 ARNTP27540 789 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 SLC1A2P43004 574 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 BAG6P46379 1132 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 SLC12A2P55011 1212 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 CREB5Q02930 508 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 SULT2A1Q06520 285 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 EML3Q32P44 896 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 RWDD4Q6NW29 188 aaKnown RBP15.8■□□□□ 0.12
NUP88-207ENST00000573584 ARHGAP36Q6ZRI8 547 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 PPHLN1Q8NEY8 458 aaKnown RBP15.8■□□□□ 0.12
NUP88-207ENST00000573584 LRTOMTQ8WZ04 291 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 RNF34Q969K3 372 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 CHST12Q9NRB3 414 aa15.8■□□□□ 0.12
NUP88-207ENST00000573584 CACNG3O60359 315 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 ARSAP15289 507 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 RANBP1P43487 201 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 CXCR3P49682 368 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 COG7P83436 770 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 RHDQ02161 417 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 UBXN11Q5T124 520 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 GPRC5AQ8NFJ5 357 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 OSBPL2Q9H1P3 480 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 CYP4F12Q9HCS2 524 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 TMEM30AQ9NV96 361 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 CACNA2D2Q9NY47 1150 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 CCDC167Q9P0B6 97 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 BRCA1P38398 1863 aaKnown RBP15.79■□□□□ 0.12
NUP88-207ENST00000573584 A0A1B0GTW7 788 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 H3BSA7 217 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 C8BP07358 591 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 PSMD8P48556 350 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 ZNF135P52742 658 aaPredicted RBP15.79■□□□□ 0.12
NUP88-207ENST00000573584 DNAJB13P59910 316 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 RALGDSQ12967 914 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 LRP8Q14114 963 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 FASTKQ14296 549 aaKnown RBP15.79■□□□□ 0.12
NUP88-207ENST00000573584 ADRM1Q16186 407 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 DUSP28Q4G0W2 176 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 AGKQ53H12 422 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 ZNF470Q6ECI4 717 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 CHSY3Q70JA7 882 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 RNF135Q8IUD6 432 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 ZMIZ2Q8NF64 920 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 DNAJB3Q8WWF6 145 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 FICDQ9BVA6 458 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 TRPV6Q9H1D0 765 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 HSFX1Q9UBD0 423 aa15.79■□□□□ 0.12
NUP88-207ENST00000573584 PADI4Q9UM07 663 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms