RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 SPOCK2Q92563 424 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 FAM131CQ96AQ9 280 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 PPP1R2P1Q96PQ5 205 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 OMDQ99983 421 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 HERPUD2Q9BSE4 406 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 HDAC8Q9BY41 377 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 KDM4CQ9H3R0 1056 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 RBM22Q9NW64 420 aaKnown RBP eCLIP20.56■□□□□ 0.88
RNF40-210ENST00000566811 SAE1Q9UBE0 346 aaPredicted RBP20.56■□□□□ 0.88
RNF40-210ENST00000566811 TRHDEQ9UKU6 1024 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 H7C0C1 242 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 KPNA3O00505 521 aaPredicted RBP20.55■□□□□ 0.88
RNF40-210ENST00000566811 MID1O15344 667 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 TUBB4AP04350 444 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 ATP1A1P05023 1023 aaKnown RBP20.55■□□□□ 0.88
RNF40-210ENST00000566811 CTSLP07711 333 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 CR2P20023 1033 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 NFKBIAP25963 317 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 ID4P47928 161 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 ATP5OP48047 213 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 PXNP49023 591 aaPredicted RBP20.55■□□□□ 0.88
RNF40-210ENST00000566811 DMWDQ09019 674 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 SLC14A2Q15849 920 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 MAP7D1Q3KQU3 841 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 ZNF805Q5CZA5 627 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 ATXN7L2Q5T6C5 722 aaPredicted RBP20.55■□□□□ 0.88
RNF40-210ENST00000566811 BRAT1Q6PJG6 821 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 ZC3H18Q86VM9 953 aaKnown RBP20.55■□□□□ 0.88
RNF40-210ENST00000566811 RASGEF1CQ8N431 466 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 CHST14Q8NCH0 376 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 RAB7BQ96AH8 199 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 EXOC2Q96KP1 924 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 OSBPL9Q96SU4 736 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 BTBD1Q9H0C5 482 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 NT5MQ9NPB1 228 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 SCUBE2Q9NQ36 999 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 FBXL12Q9NXK8 326 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 DKK3Q9UBP4 350 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 ATP8A1Q9Y2Q0 1164 aa20.55■□□□□ 0.88
RNF40-210ENST00000566811 IGHV1OR15-9A0A0B4J2B8 117 aa20.54■□□□□ 0.88
RNF40-210ENST00000566811 KCNK1O00180 336 aa20.54■□□□□ 0.88
RNF40-210ENST00000566811 CEP104O60308 925 aa20.54■□□□□ 0.88
RNF40-210ENST00000566811 FGGP02679 453 aa20.54■□□□□ 0.88
RNF40-210ENST00000566811 CD6P30203 668 aa20.54■□□□□ 0.88
RNF40-210ENST00000566811 SCNN1BP51168 640 aa20.54■□□□□ 0.88
RNF40-210ENST00000566811 NEK3P51956 506 aa20.54■□□□□ 0.88
RNF40-210ENST00000566811 BCL2L1Q07817 233 aa20.54■□□□□ 0.88
RNF40-210ENST00000566811 TEX44Q53QW1 395 aa20.54■□□□□ 0.88
RNF40-210ENST00000566811 ARSIQ5FYB1 569 aa20.54■□□□□ 0.88
RNF40-210ENST00000566811 CFAP58Q5T655 872 aa20.54■□□□□ 0.88
RNF40-210ENST00000566811 PAPD7Q5XG87 772 aaKnown RBP20.54■□□□□ 0.88
RNF40-210ENST00000566811 GDPD4Q6W3E5 623 aa20.54■□□□□ 0.88
RNF40-210ENST00000566811 ERMP1Q7Z2K6 904 aa20.54■□□□□ 0.88
RNF40-210ENST00000566811 SLC6A17Q9H1V8 727 aa20.54■□□□□ 0.88
RNF40-210ENST00000566811 EPC1Q9H2F5 836 aa20.54■□□□□ 0.88
RNF40-210ENST00000566811 EVLQ9UI08 416 aaPredicted RBP20.54■□□□□ 0.88
RNF40-210ENST00000566811 TSPAN11A1L157 253 aa20.53■□□□□ 0.88
RNF40-210ENST00000566811 PGRMC1O00264 195 aaKnown RBP20.53■□□□□ 0.88
RNF40-210ENST00000566811 INSIG1O15503 277 aa20.53■□□□□ 0.88
RNF40-210ENST00000566811 RNASEH2AO75792 299 aaKnown RBP20.53■□□□□ 0.88
RNF40-210ENST00000566811 SERPINF2P08697 491 aa20.53■□□□□ 0.88
RNF40-210ENST00000566811 DRD3P35462 400 aa20.53■□□□□ 0.88
RNF40-210ENST00000566811 ETF1P62495 437 aaKnown RBP20.53■□□□□ 0.88
RNF40-210ENST00000566811 ELF2Q15723 593 aa20.53■□□□□ 0.88
RNF40-210ENST00000566811 DRICH1Q6PGQ1 229 aaPredicted RBP20.53■□□□□ 0.88
RNF40-210ENST00000566811 DARS2Q6PI48 645 aaKnown RBP20.53■□□□□ 0.88
RNF40-210ENST00000566811 CACUL1Q86Y37 369 aa20.53■□□□□ 0.88
RNF40-210ENST00000566811 HDDC3Q8N4P3 179 aa20.53■□□□□ 0.88
RNF40-210ENST00000566811 AADATQ8N5Z0 425 aa20.53■□□□□ 0.88
RNF40-210ENST00000566811 SLC35B2Q8TB61 432 aa20.53■□□□□ 0.88
RNF40-210ENST00000566811 ACTRT1Q8TDG2 376 aa20.53■□□□□ 0.88
RNF40-210ENST00000566811 SARDHQ9UL12 918 aa20.53■□□□□ 0.88
RNF40-210ENST00000566811 CYP8B1Q9UNU6 501 aa20.53■□□□□ 0.88
RNF40-210ENST00000566811 THADAQ6YHU6 1953 aa20.53■□□□□ 0.88
RNF40-210ENST00000566811 LRRC72A6NJI9 287 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 KIF2AO00139 706 aaPredicted RBP20.52■□□□□ 0.88
RNF40-210ENST00000566811 MUSKO15146 869 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 JCHAINP01591 159 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 HLA-DQB2P05538 268 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 UGT2B4P06133 528 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 PTPN3P26045 913 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 CXCR5P32302 372 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 DPP6P42658 865 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 RGRP47804 291 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 POLR2LP62875 67 aaKnown RBP20.52■□□□□ 0.88
RNF40-210ENST00000566811 ZBTB17Q13105 803 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 LONRF2Q1L5Z9 754 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 ITPRIPL1Q6GPH6 555 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 NCEH1Q6PIU2 408 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 ERN2Q76MJ5 926 aaKnown RBP20.52■□□□□ 0.88
RNF40-210ENST00000566811 CEP68Q76N32 757 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 PGBD5Q8N414 524 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 CADM4Q8NFZ8 388 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 OR6K2Q8NGY2 324 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 GANCQ8TET4 914 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 FOXJ1Q92949 421 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 ZNF419Q96HQ0 510 aaPredicted RBP20.52■□□□□ 0.88
RNF40-210ENST00000566811 ZC3H10Q96K80 434 aaKnown RBP20.52■□□□□ 0.88
RNF40-210ENST00000566811 TEKT5Q96M29 485 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 SUV39H2Q9H5I1 410 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms