RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 RHOQP17081 205 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 ADRA1BP35368 520 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 ADKP55263 362 aaKnown RBP13.18□□□□□ -0.3
SF3B3-202ENST00000562722 CFHR1Q03591 330 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 EIF2B5Q13144 721 aaKnown RBP13.18□□□□□ -0.3
SF3B3-202ENST00000562722 C1orf61Q13536 156 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 MYLK3Q32MK0 819 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 RAB6CQ53S08 254 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 PRRT3Q5FWE3 981 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 TPRG1LQ5T0D9 272 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 ATXN7L2Q5T6C5 722 aaPredicted RBP13.18□□□□□ -0.3
SF3B3-202ENST00000562722 FAXCQ5TGI0 409 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 DPY19L2P1Q6NXN4 242 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 ARCQ7LC44 396 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 BNIPLQ7Z465 357 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 TTC7BQ86TV6 843 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 RBFAQ8N0V3 343 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 DENND6BQ8NEG7 585 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 EPS8L1Q8TE68 723 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 CXorf40AQ8TE69 158 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 SLC20A1Q8WUM9 679 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 ATXN7L3BQ96GX2 97 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 HIC2Q96JB3 615 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 KLHL32Q96NJ5 620 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 KLF6Q99612 283 aaPredicted RBP13.18□□□□□ -0.3
SF3B3-202ENST00000562722 C1QTNF7Q9BXJ2 289 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 NAA15Q9BXJ9 866 aaKnown RBP13.18□□□□□ -0.3
SF3B3-202ENST00000562722 OSBPL1AQ9BXW6 950 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 RAB6CQ9H0N0 254 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 MAGEH1Q9H213 219 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 SALL4Q9UJQ4 1053 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 SHROOM3Q8TF72 1996 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 ERVH48-1M5A8F1 160 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 RIOK3O14730 519 aaKnown RBP13.17□□□□□ -0.3
SF3B3-202ENST00000562722 MMP20O60882 483 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 DXOO77932 396 aaKnown RBP13.17□□□□□ -0.3
SF3B3-202ENST00000562722 LRIG2O94898 1065 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 GJB6O95452 261 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 POP4O95707 220 aaKnown RBP13.17□□□□□ -0.3
SF3B3-202ENST00000562722 CD160O95971 181 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 ANXA6P08133 673 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 PLEKP08567 350 aaPredicted RBP13.17□□□□□ -0.3
SF3B3-202ENST00000562722 XPAP23025 273 aaPredicted RBP13.17□□□□□ -0.3
SF3B3-202ENST00000562722 ERCC5P28715 1186 aaPredicted RBP13.17□□□□□ -0.3
SF3B3-202ENST00000562722 PFN3P60673 137 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 RAD51Q06609 339 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 CCDC14Q49A88 953 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 ARTNQ5T4W7 220 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 GDPD4Q6W3E5 623 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 ZNF677Q86XU0 584 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 PLPP6Q8IY26 295 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 PHACTR4Q8IZ21 702 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 ZNF843Q8N446 348 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 TPCN2Q8NHX9 752 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 SLC30A5Q8TAD4 765 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 GPT2Q8TD30 523 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 ASB12Q8WXK4 309 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 GDAP1L1Q96MZ0 367 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 WRAP53Q9BUR4 548 aaKnown RBP13.17□□□□□ -0.3
SF3B3-202ENST00000562722 TCEAL2Q9H3H9 227 aaPredicted RBP13.17□□□□□ -0.3
SF3B3-202ENST00000562722 CLSTN2Q9H4D0 955 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 TMEM248Q9NWD8 314 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 TAB2Q9NYJ8 693 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 DOLKQ9UPQ8 538 aa13.17□□□□□ -0.3
SF3B3-202ENST00000562722 TDRD6O60522 2096 aaKnown RBP13.17□□□□□ -0.3
SF3B3-202ENST00000562722 GCN1Q92616 2671 aaKnown RBP13.16□□□□□ -0.3
SF3B3-202ENST00000562722 CXorf51AA0A1B0GTR3 108 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 EME2A4GXA9 379 aaPredicted RBP13.16□□□□□ -0.3
SF3B3-202ENST00000562722 FAM72CH0Y354 149 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 TPP1O14773 563 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 KDELR3O43731 214 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 TM7SF2O76062 418 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 TMCC1O94876 653 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 IGSF6O95976 241 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 TPM2P07951 284 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 PLA2G2AP14555 144 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 MMP8P22894 467 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 EEF1GP26641 437 aaKnown RBP13.16□□□□□ -0.3
SF3B3-202ENST00000562722 IGFALSP35858 605 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 RHOAP61586 193 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 CDR2Q01850 454 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 RHDQ02161 417 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 NRG1Q02297 640 aaPredicted RBP13.16□□□□□ -0.3
SF3B3-202ENST00000562722 TCEA2Q15560 299 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 TCP11X2Q5H9J9 407 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 PERM1Q5SV97 790 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 FAM72AQ5TYM5 149 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 MANEALQ5VSG8 457 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 FAM72DQ6L9T8 149 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 ESRP1Q6NXG1 681 aaKnown RBP13.16□□□□□ -0.3
SF3B3-202ENST00000562722 NLRP14Q86W24 1093 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 FAM72BQ86X60 149 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 CCDC185Q8N715 623 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 JOSD2Q8TAC2 188 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 FAM172AQ8WUF8 416 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 NAT6Q93015 286 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 EPAS1Q99814 870 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 NCAPGQ9BPX3 1015 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.16□□□□□ -0.3
SF3B3-202ENST00000562722 LRRC61Q9BV99 259 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms