RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 PGBD3Q8N328 593 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 CHST14Q8NCH0 376 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 HCAR2Q8TDS4 363 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 HMGB4Q8WW32 186 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 ZNF419Q96HQ0 510 aaPredicted RBP12.42□□□□□ -0.42
USP8-209ENST00000560297 PPP1R16AQ96I34 528 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 SPATA13Q96N96 652 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 RUNDC3BQ96NL0 473 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 PPP1R2P1Q96PQ5 205 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 HHIPQ96QV1 700 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 SEMA3CQ99985 751 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 FAM126AQ9BYI3 521 aaPredicted RBP12.42□□□□□ -0.42
USP8-209ENST00000560297 SLC25A51Q9H1U9 297 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 ZDHHC6Q9H6R6 413 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 ATP13A3Q9H7F0 1226 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 C10orf88Q9H8K7 445 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 GLOD4Q9HC38 313 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 POLR3BQ9NW08 1133 aaPredicted RBP12.42□□□□□ -0.42
USP8-209ENST00000560297 SMARCAL1Q9NZC9 954 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 BCCIPQ9P287 314 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP8-209ENST00000560297 EVLQ9UI08 416 aaPredicted RBP12.42□□□□□ -0.42
USP8-209ENST00000560297 MIA3Q5JRA6 1907 aa12.42□□□□□ -0.42
USP8-209ENST00000560297 A0A1W2PQ67 120 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 PHF2O75151 1096 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 ZNF217O75362 1048 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 LEFTY1O75610 366 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 NDUFV2P19404 249 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 CA4P22748 312 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 SERPINA4P29622 427 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 COILP38432 576 aaPredicted RBP12.41□□□□□ -0.42
USP8-209ENST00000560297 RGRP47804 291 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 FNTAP49354 379 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 MAXP61244 160 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 CSTF1Q05048 431 aaKnown RBP12.41□□□□□ -0.42
USP8-209ENST00000560297 CKAP4Q07065 602 aaKnown RBP12.41□□□□□ -0.42
USP8-209ENST00000560297 SLC14A2Q15849 920 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 WHAMMP3Q1A5X7 153 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 P3H1Q32P28 736 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 TTC31Q49AM3 519 aaPredicted RBP12.41□□□□□ -0.42
USP8-209ENST00000560297 ZNF805Q5CZA5 627 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 ANO7Q6IWH7 933 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 GDPD4Q6W3E5 623 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 CCDC89Q8N998 374 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 OR6K2Q8NGY2 324 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 ARRDC2Q8TBH0 407 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 PIP4K2CQ8TBX8 421 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 GRK7Q8WTQ7 553 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 IMP4Q96G21 291 aaKnown RBP12.41□□□□□ -0.42
USP8-209ENST00000560297 EXOC2Q96KP1 924 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 FCRL5Q96RD9 977 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 PRRX2Q99811 253 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 LRFN3Q9BTN0 628 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 SUV39H2Q9H5I1 410 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 NOD2Q9HC29 1040 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 ITM2CQ9NQX7 267 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 DYRK4Q9NR20 520 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 VPS45Q9NRW7 570 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 DKK3Q9UBP4 350 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 NCKAP1Q9Y2A7 1128 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 TTLL3Q9Y4R7 772 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 WASF2Q9Y6W5 498 aa12.41□□□□□ -0.42
USP8-209ENST00000560297 ZDBF2Q9HCK1 2354 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 PDE2AO00408 941 aaPredicted RBP12.4□□□□□ -0.42
USP8-209ENST00000560297 KPNA3O00505 521 aaPredicted RBP12.4□□□□□ -0.42
USP8-209ENST00000560297 AXIN1O15169 862 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 SOCS5O75159 536 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 ANXA9O76027 345 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 IFNB1P01574 187 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 CTSLP07711 333 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 CD68P34810 354 aaPredicted RBP12.4□□□□□ -0.42
USP8-209ENST00000560297 KCNJ1P48048 391 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 POLR2LP62875 67 aaKnown RBP12.4□□□□□ -0.42
USP8-209ENST00000560297 DSC2Q02487 901 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 NIPAL4Q0D2K0 466 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 PRPSAP1Q14558 356 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 PARP6Q2NL67 630 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 ZNF528Q3MIS6 628 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 BRAT1Q6PJG6 821 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 CCDC137Q6PK04 289 aaKnown RBP12.4□□□□□ -0.42
USP8-209ENST00000560297 KIAA1324Q6UXG2 1013 aaKnown RBP12.4□□□□□ -0.42
USP8-209ENST00000560297 ARHGEF18Q6ZSZ5 1173 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 USP30Q70CQ3 517 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 KBTBD6Q86V97 674 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 MAML2Q8IZL2 1156 aaPredicted RBP12.4□□□□□ -0.42
USP8-209ENST00000560297 MDGA1Q8NFP4 955 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 CCDC110Q8TBZ0 833 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 GRIN3AQ8TCU5 1115 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 ERLEC1Q96DZ1 483 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 HDAC8Q9BY41 377 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 CEP41Q9BYV8 373 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 GBA3Q9H227 469 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 PABPC3Q9H361 631 aaKnown RBP12.4□□□□□ -0.42
USP8-209ENST00000560297 PAK5Q9P286 719 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 PCYOX1Q9UHG3 505 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 RSPH14Q9UHP6 348 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 SARDHQ9UL12 918 aa12.4□□□□□ -0.42
USP8-209ENST00000560297 AAR2Q9Y312 384 aaKnown RBP12.4□□□□□ -0.42
USP8-209ENST00000560297 ATG2BQ96BY7 2078 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 GOLGA6CA6NDK9 693 aa12.39□□□□□ -0.43
USP8-209ENST00000560297 GOLGA6BA6NDN3 693 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms