RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 FAM157AC9JC47 383 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 USP17L23D6RBM5 183 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 MASP2O00187 686 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 SH2B2O14492 632 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-209ENST00000553280 MGST3O14880 152 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 SCAMP1O15126 338 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 NFATC1O95644 943 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 PLAUP00749 431 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 GCP02774 474 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 LCKP06239 509 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 PRR35P0CG20 571 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 SLC2A4P14672 509 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 ST6GAL1P15907 406 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 PTPN2P17706 415 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 MCM3P25205 808 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 PLA2G5P39877 138 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 PIP4K2AP48426 406 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-209ENST00000553280 CACNA2D1P54289 1103 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 COL10A1Q03692 680 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 OLIG2Q13516 323 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 GALNT3Q14435 633 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 VEPH1Q14D04 833 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 CCDC184Q52MB2 194 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 HECTD2Q5U5R9 776 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 GKAP1Q5VSY0 366 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-209ENST00000553280 CPLX2Q6PUV4 134 aaKnown RBP5.3□□□□□ -1.56
SCFD1-209ENST00000553280 FAM83HQ6ZRV2 1179 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-209ENST00000553280 WDR5BQ86VZ2 330 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 SCML4Q8N228 414 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 MMABQ96EY8 250 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-209ENST00000553280 RADILQ96JH8 1075 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 RITA1Q96K30 269 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 ZMAT2Q96NC0 199 aaKnown RBP5.3□□□□□ -1.56
SCFD1-209ENST00000553280 HIPK3Q9H422 1215 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 PLEKHA4Q9H4M7 779 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 DLGAP2Q9P1A6 1054 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 SLC17A6Q9P2U8 582 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 NOL7Q9UMY1 257 aaKnown RBP5.3□□□□□ -1.56
SCFD1-209ENST00000553280 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 BTBD18B2RXH4 712 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 H7C0S8 307 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 IFNL4K9M1U5 179 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 KIF1CO43896 1103 aaKnown RBP5.29□□□□□ -1.56
SCFD1-209ENST00000553280 IPO7O95373 1038 aaKnown RBP5.29□□□□□ -1.56
SCFD1-209ENST00000553280 TFP02787 698 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 HOXB5P09067 269 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 CLTBP09497 229 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 TFEBP19484 476 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 BMP5P22003 454 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 PROZP22891 400 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 CDAP32320 146 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 DPP6P42658 865 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 SLC18A2Q05940 514 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 LRMPQ12912 555 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 CDC16Q13042 620 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 PSMD6Q15008 389 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 RASA2Q15283 850 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 JADE1Q6IE81 842 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 TSSK4Q6SA08 328 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 CHSY1Q86X52 802 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 OR4N2Q8NGD1 307 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 BCAS4Q8TDM0 211 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 WIPF2Q8TF74 440 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-209ENST00000553280 KAT2AQ92830 837 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 C1orf74Q96LT6 269 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 UROC1Q96N76 676 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 TEX12Q9BXU0 123 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 CPNE5Q9HCH3 593 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 ZNF304Q9HCX3 659 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 SH3GLB2Q9NR46 395 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 IL17RBQ9NRM6 502 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 RRP7BPQ9NSQ0 103 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 ABI3Q9P2A4 366 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 CHORDC1Q9UHD1 332 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-209ENST00000553280 IPO11Q9UI26 975 aaKnown RBP5.29□□□□□ -1.56
SCFD1-209ENST00000553280 SLC8A2Q9UPR5 921 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 SESN1Q9Y6P5 492 aa5.29□□□□□ -1.56
SCFD1-209ENST00000553280 UTYO14607 1347 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 CYP2D7A0A087X1C5 515 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 FAM90A8PA6NJQ4 464 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 CDRT15L2A8MXV6 281 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 SNAP23O00161 211 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 INPPL1O15357 1258 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 SEC14L5O43304 696 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 ENTPD3O75355 529 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 CSPG5O95196 566 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 FAM90A13PP0C7W8 464 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 FAM90A24PP0C7X0 464 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 CYP2A6P11509 494 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-209ENST00000553280 KLRC2P26717 231 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 YWHAQP27348 245 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 PTGER1P34995 402 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 COPB2P35606 906 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 CENPAP49450 140 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 PSMC6P62333 389 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 ROR1Q01973 937 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 FGFBP1Q14512 234 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 PPP2R5BQ15173 497 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 ALG11Q2TAA5 492 aa5.28□□□□□ -1.56
SCFD1-209ENST00000553280 CERKLQ49MI3 558 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms