RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 SLC1A1P43005 524 aa20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 HADHBP55084 474 aaKnown RBP20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 NSUN2Q08J23 767 aaKnown RBP eCLIP20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 KIF19Q2TAC6 998 aa20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 HLA-BQ31612 363 aa20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 SETMARQ53H47 684 aaPredicted RBP20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 NAPEPLDQ6IQ20 393 aa20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 LRRC49Q8IUZ0 686 aa20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 TSEN2Q8NCE0 465 aaKnown RBP20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 HCAR2Q8TDS4 363 aa20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 FEM1CQ96JP0 617 aa20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 EXOC2Q96KP1 924 aa20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 LUC7LQ9NQ29 371 aaKnown RBP20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 AASDHPPTQ9NRN7 309 aa20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 DKK3Q9UBP4 350 aa20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 PCDHA13Q9Y5I0 950 aa20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 FADS3Q9Y5Q0 445 aa20.35■□□□□ 0.85
CACNA2D4-215ENST00000542340 CNOT1A5YKK6 2376 aaKnown RBP20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 A0A1W2PR77 199 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 WNT9AO14904 365 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 PCDH8O95206 1070 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 CSRP1P21291 193 aaKnown RBP20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 CD38P28907 300 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 CDC25BP30305 580 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 PAFAH1B3Q15102 231 aaKnown RBP20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 ZNF284Q2VY69 593 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 SLC45A4Q5BKX6 768 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 ANKRD20A8PQ5CZ79 823 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 PPM1JQ5JR12 505 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 TMCO4Q5TGY1 634 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 LRRC38Q5VT99 294 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 PCDH19Q8TAB3 1148 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 FAF2Q96CS3 445 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 CINPQ9BW66 212 aaPredicted RBP20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 GAREM1Q9H706 876 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 SEPT3Q9UH03 358 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 SNX11Q9Y5W9 270 aa20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 EPN1Q9Y6I3 576 aaPredicted RBP20.34■□□□□ 0.85
CACNA2D4-215ENST00000542340 KNL1Q8NG31 2342 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 ASCC3Q8N3C0 2202 aaKnown RBP20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 PRAMEF26H0Y7S4 382 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 INSIG1O15503 277 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 TSPAN6O43657 245 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 MAFKO60675 156 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 ZNF883P0CG24 379 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 KDELR1P24390 212 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 CTSKP43235 329 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 RENBPP51606 427 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 C21orf59P57076 290 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 RPS21P63220 83 aaKnown RBP20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 LBRQ14739 615 aaKnown RBP20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 TMEM259Q4ZIN3 620 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 ZFYVE27Q5T4F4 411 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 KIAA1161Q6NSJ0 714 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 LAYNQ6UX15 382 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 SRLQ86TD4 932 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 ZSCAN30Q86W11 494 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 MFSD2AQ8NA29 543 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 ZNF641Q96N77 438 aaPredicted RBP20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 PSKH2Q96QS6 385 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 TUBGCP5Q96RT8 1024 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 KLHL11Q9NVR0 708 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 IMPACTQ9P2X3 320 aa20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 ZFR2Q9UPR6 939 aaKnown RBP20.33■□□□□ 0.85
CACNA2D4-215ENST00000542340 SOWAHDA6NJG2 315 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 ZNF487B1APH4 448 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 KCNK5O95279 499 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 NDUFA10O95299 355 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 PEX11BO96011 259 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 WNT1P04628 370 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 CD59P13987 128 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 ABL2P42684 1182 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 NOP2P46087 812 aaKnown RBP20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 SLC10A7Q0GE19 358 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 NCBP2-AS2Q69YL0 99 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 PIP4P1Q86T03 277 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 TTC7BQ86TV6 843 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 IQCHQ86VS3 1027 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 VSIG1Q86XK7 387 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 ATPAF2Q8N5M1 289 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 RAPGEF5Q92565 580 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 SUV39H2Q9H5I1 410 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 IL21RQ9HBE5 538 aa20.32■□□□□ 0.84
CACNA2D4-215ENST00000542340 PLXNA2O75051 1894 aa20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 A0A0A6YYK5 440 aaPredicted RBP20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 AREL1O15033 823 aa20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 SLC31A1O15431 190 aa20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 DFNA5O60443 496 aa20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 IPO7O95373 1038 aaKnown RBP20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 CEACAM1P13688 526 aa20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 COMTP21964 271 aa20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 HSPA9P38646 679 aaKnown RBP20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 RGRP47804 291 aa20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 SUOXP51687 545 aa20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 GALNT2Q10471 571 aa20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 OVGP1Q12889 678 aa20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 STAT4Q14765 748 aa20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 SEL1L3Q68CR1 1132 aa20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 RHOT1Q8IXI2 618 aa20.31■□□□□ 0.84
CACNA2D4-215ENST00000542340 PQLC3Q8N755 202 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms