RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 NSMCE3Q96MG7 304 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 KLHL32Q96NJ5 620 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 ANP32EQ9BTT0 268 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 OSBPL1AQ9BXW6 950 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 IMPACTQ9P2X3 320 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 TPX2Q9ULW0 747 aaKnown RBP17.12■□□□□ 0.33
CD9-209ENST00000540891 ZFR2Q9UPR6 939 aaKnown RBP17.12■□□□□ 0.33
CD9-209ENST00000540891 FADS3Q9Y5Q0 445 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 A0A0A6YYK5 440 aaPredicted RBP17.11■□□□□ 0.33
CD9-209ENST00000540891 A0A1W2PQU0 124 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 A0A1W2PR77 199 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 C3orf70A6NLC5 250 aaPredicted RBP17.11■□□□□ 0.33
CD9-209ENST00000540891 PIGNO95427 931 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 SERPINB6P35237 376 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 SLC1A1P43005 524 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 KIF19Q2TAC6 998 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 ZNF284Q2VY69 593 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 LRRC38Q5VT99 294 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 SEL1L3Q68CR1 1132 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 NEK5Q6P3R8 708 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 FBXL19Q6PCT2 694 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 DGLUCYQ7Z3D6 616 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 PRPF39Q86UA1 669 aaKnown RBP17.11■□□□□ 0.33
CD9-209ENST00000540891 MAP7D3Q8IWC1 876 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 ZNF599Q96NL3 588 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 CPEB1Q9BZB8 566 aaKnown RBP17.11■□□□□ 0.33
CD9-209ENST00000540891 ZDHHC5Q9C0B5 715 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 GOLPH3Q9H4A6 298 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 DNAAF2Q9NVR5 837 aaKnown RBP17.11■□□□□ 0.33
CD9-209ENST00000540891 GGT7Q9UJ14 662 aa17.11■□□□□ 0.33
CD9-209ENST00000540891 VILLO15195 856 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 AP1G1O43747 822 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 MAP3K6O95382 1288 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 NOP2P46087 812 aaKnown RBP17.1■□□□□ 0.33
CD9-209ENST00000540891 CSNK1DP48730 415 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 ATXN3P54252 364 aaPredicted RBP17.1■□□□□ 0.33
CD9-209ENST00000540891 RAD51Q06609 339 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 GALNT2Q10471 571 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 LBRQ14739 615 aaKnown RBP17.1■□□□□ 0.33
CD9-209ENST00000540891 UAP1L1Q3KQV9 507 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 TMEM259Q4ZIN3 620 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 TMCO4Q5TGY1 634 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 HORMAD1Q86X24 394 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 PGBD5Q8N414 524 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 ATPAF2Q8N5M1 289 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 ACRBPQ8NEB7 543 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 KLK6Q92876 244 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 SERAC1Q96JX3 654 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 RNF157Q96PX1 679 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 PSKH2Q96QS6 385 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 BAG1Q99933 345 aaPredicted RBP17.1■□□□□ 0.33
CD9-209ENST00000540891 CINPQ9BW66 212 aaPredicted RBP17.1■□□□□ 0.33
CD9-209ENST00000540891 IL21RQ9HBE5 538 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 DKK3Q9UBP4 350 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 ITM2BQ9Y287 266 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 ANKRD6Q9Y2G4 727 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 SNX11Q9Y5W9 270 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 ALG6Q9Y672 507 aa17.1■□□□□ 0.33
CD9-209ENST00000540891 TSPAN11A1L157 253 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 LRRD1A4D1F6 860 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 ZNF487B1APH4 448 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 AREL1O15033 823 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 TIMP2P16035 220 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 PRLRP16471 622 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 ITIH2P19823 946 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 CTSKP43235 329 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 GBE1Q04446 702 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 NSUN2Q08J23 767 aaKnown RBP eCLIP17.09■□□□□ 0.33
CD9-209ENST00000540891 SLC10A2Q12908 348 aaPredicted RBP17.09■□□□□ 0.33
CD9-209ENST00000540891 FGL2Q14314 439 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 TEAD4Q15561 434 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 HLA-BQ31612 363 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 LRRC73Q5JTD7 316 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 ZFYVE27Q5T4F4 411 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 NAPEPLDQ6IQ20 393 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 SRLQ86TD4 932 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 ZSWIM9Q86XI8 627 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 VSIG1Q86XK7 387 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 RHOT1Q8IXI2 618 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 RAB7BQ96AH8 199 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 LACRTQ9GZZ8 138 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 AASDHPPTQ9NRN7 309 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 SEPT3Q9UH03 358 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 DMTF1Q9Y222 760 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 CA5BQ9Y2D0 317 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 FNDC3AQ9Y2H6 1198 aaKnown RBP17.09■□□□□ 0.33
CD9-209ENST00000540891 DUSP10Q9Y6W6 482 aa17.09■□□□□ 0.33
CD9-209ENST00000540891 DOCK9Q9BZ29 2069 aa17.08■□□□□ 0.33
CD9-209ENST00000540891 TTC24A2A3L6 582 aaPredicted RBP17.08■□□□□ 0.32
CD9-209ENST00000540891 KCNK3O14649 394 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 SLC31A1O15431 190 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 SPOPO43791 374 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 OPHN1O60890 802 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 PCDH8O95206 1070 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 KRT1P04264 644 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 CD59P13987 128 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 CR2P20023 1033 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 CD38P28907 300 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 NUDT1P36639 197 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 GARSP41250 739 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms