RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 GZMAP12544 262 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 RARGP13631 454 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 TNFAIP3P21580 790 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 NSFP46459 744 aaKnown RBP9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 SLC7A9P82251 487 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 HTR4Q13639 388 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 ARHGAP15Q53QZ3 475 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 FAM78AQ5JUQ0 283 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 OTUD1Q5VV17 481 aaPredicted RBP9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 BSPRYQ5W0U4 402 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 MSANTD2Q6P1R3 559 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 KLHDC10Q6PID8 442 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 ERICH1Q86X53 443 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 ZDHHC17Q8IUH5 632 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 CMTM8Q8IZV2 173 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 ARHGAP18Q8N392 663 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 ARL14EPQ8N8R7 260 aaPredicted RBP9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 MAB21L3Q8N8X9 362 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 SPC24Q8NBT2 197 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 IPO4Q8TEX9 1081 aaKnown RBP9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 FGF14Q92915 247 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 C18orf8Q96DM3 657 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 RPGRIP1Q96KN7 1286 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 LRRC3BQ96PB8 259 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 SLC2A13Q96QE2 648 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 CYP2S1Q96SQ9 504 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 MENTQ9BUN1 341 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 ISCUQ9H1K1 167 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 TRPC7Q9HCX4 862 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 MUTYHQ9UIF7 546 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 ADAM29Q9UKF5 820 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 ARHGAP26Q9UNA1 814 aa9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 ZFP37Q9Y6Q3 630 aaPredicted RBP9.1□□□□□ -0.95
CCDC90B-217ENST00000530253 MYO10Q9HD67 2058 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 TRAV19A0A0A6YYK7 116 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 PI4K2BG5E9Z4 385 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 MDM4O15151 490 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 DAB1O75553 588 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 IGLV3-25P01717 112 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 TCF3P15923 654 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 RRM1P23921 792 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 VIPR2P41587 438 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 PITX1P78337 314 aaPredicted RBP9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 SLC6A3Q01959 620 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 EIF4EBP2Q13542 120 aaPredicted RBP9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 ZNF268Q14587 947 aaPredicted RBP9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 ZNF77Q15935 545 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 SLC18A3Q16572 532 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 HECTD3Q5T447 861 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 SYPL2Q5VXT5 272 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 OR6B2Q6IFH4 312 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 PARM1Q6UWI2 310 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 TOGARAM2Q6ZUX3 1019 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 MCOLN2Q8IZK6 566 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 ST13P5Q8NFI4 369 aaPredicted RBP9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 DQX1Q8TE96 717 aaKnown RBP9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 SMARCD2Q92925 531 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 USP13Q92995 863 aaPredicted RBP9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 WBP2Q969T9 261 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 PDLIM2Q96JY6 352 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 LRFN3Q9BTN0 628 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 RPP25Q9BUL9 199 aaKnown RBP9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 LGR4Q9BXB1 951 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 NHEJ1Q9H9Q4 299 aaPredicted RBP9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 SEC61A2Q9H9S3 476 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 SEPT11Q9NVA2 429 aaKnown RBP9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 ADAM22Q9P0K1 906 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 FBXL7Q9UJT9 491 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 CCL26Q9Y258 94 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 NR2E1Q9Y466 385 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 NUMBLQ9Y6R0 609 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 MYH10P35580 1976 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 COL4A3Q01955 1670 aa9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 HELZP42694 1942 aaKnown RBP9.09□□□□□ -0.95
CCDC90B-217ENST00000530253 COL4A2P08572 1712 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 TECTAO75443 2155 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 TMCO5BA8MYB1 307 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 HSF2BPO75031 334 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 RTN2O75298 545 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 ECI2O75521 394 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 LCA5LO95447 670 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 GJB6O95452 261 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 IGLV3-27P01718 113 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 CALB1P05937 261 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 CKMP06732 381 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 HDCP19113 662 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 FLT3P36888 993 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 GFRA1P56159 465 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 YWHAZP63104 245 aaKnown RBP9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 GFPT1Q06210 699 aaPredicted RBP9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 MTF1Q14872 753 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 EFHC1Q5JVL4 640 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 FAM102AQ5T9C2 384 aaPredicted RBP9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 BTBD8Q5XKL5 378 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 VASNQ6EMK4 673 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 TANGO2Q6ICL3 276 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 PLEKHA7Q6IQ23 1121 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 PPP1R2P3Q6NXS1 205 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 RAD9BQ6WBX8 426 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 ARCQ7LC44 396 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms