RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 COMTP21964 271 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 KCNA4P22459 653 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 MARCKSL1P49006 195 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 IL10RBQ08334 325 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 FGL2Q14314 439 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 TCEAL1Q15170 157 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 KIF19Q2TAC6 998 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 ANKRD20A8PQ5CZ79 823 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 ZNF805Q5CZA5 627 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 DGLUCYQ7Z3D6 616 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 RABEPKQ7Z6M1 372 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 TRIM69Q86WT6 500 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 CCDC170Q8IYT3 715 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 PGBD5Q8N414 524 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 KCTD6Q8NC69 237 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 CASKIN2Q8WXE0 1202 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 FAF2Q96CS3 445 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 ZNF670Q9BS34 389 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 FADS3Q9Y5Q0 445 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 EPN1Q9Y6I3 576 aaPredicted RBP18.1■□□□□ 0.49
CLK4-211ENST00000522556 TRPM6Q9BX84 2022 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 KNL1Q8NG31 2342 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 A0A1W2PR77 199 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 MED19A0JLT2 244 aaPredicted RBP18.09■□□□□ 0.49
CLK4-211ENST00000522556 LRRD1A4D1F6 860 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 MAFKO60675 156 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 KDELR1P24390 212 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 CDC25BP30305 580 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 CYLC1P35663 651 aaPredicted RBP18.09■□□□□ 0.49
CLK4-211ENST00000522556 AFF3P51826 1226 aaKnown RBP18.09■□□□□ 0.49
CLK4-211ENST00000522556 GBE1Q04446 702 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 SLC10A2Q12908 348 aaPredicted RBP18.09■□□□□ 0.49
CLK4-211ENST00000522556 ZNF284Q2VY69 593 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 PRAMEF14Q5SWL7 426 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 ZFYVE27Q5T4F4 411 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 GDPD4Q6W3E5 623 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 LZTR1Q8N653 840 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 PPP1R16AQ96I34 528 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 SERAC1Q96JX3 654 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 PREBQ9HCU5 417 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 AASDHPPTQ9NRN7 309 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 DONSONQ9NYP3 566 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 RCOR3Q9P2K3 495 aaPredicted RBP18.09■□□□□ 0.49
CLK4-211ENST00000522556 DUSP10Q9Y6W6 482 aa18.09■□□□□ 0.49
CLK4-211ENST00000522556 H0Y8X5 98 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 SLC31A1O15431 190 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 PCDH8O95206 1070 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 KRT1P04264 644 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 PRKCGP05129 697 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 KRT7P08729 469 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 ARHGAP25P42331 645 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 NOP2P46087 812 aaKnown RBP18.08■□□□□ 0.48
CLK4-211ENST00000522556 GRIA4P48058 902 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 ATXN3P54252 364 aaPredicted RBP18.08■□□□□ 0.48
CLK4-211ENST00000522556 SEMG2Q02383 582 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 PAFAH1B3Q15102 231 aaKnown RBP18.08■□□□□ 0.48
CLK4-211ENST00000522556 LLGL1Q15334 1064 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 TMEM259Q4ZIN3 620 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 FBXL19Q6PCT2 694 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 CAMK1DQ8IU85 385 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 TMTC1Q8IUR5 882 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 ATPAF2Q8N5M1 289 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 DESI2Q9BSY9 194 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 CINPQ9BW66 212 aaPredicted RBP18.08■□□□□ 0.48
CLK4-211ENST00000522556 LACRTQ9GZZ8 138 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 KDM4CQ9H3R0 1056 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 ANKRD6Q9Y2G4 727 aa18.08■□□□□ 0.48
CLK4-211ENST00000522556 RAD51BO15315 384 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 SYPP08247 313 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 CD59P13987 128 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 HADHBP55084 474 aaKnown RBP18.07■□□□□ 0.48
CLK4-211ENST00000522556 MAXP61244 160 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 RACK1P63244 317 aaKnown RBP18.07■□□□□ 0.48
CLK4-211ENST00000522556 GALNT2Q10471 571 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 LBRQ14739 615 aaKnown RBP18.07■□□□□ 0.48
CLK4-211ENST00000522556 PDK2Q15119 407 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 SPA17Q15506 151 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 HLA-BQ31612 363 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 TMCO4Q5TGY1 634 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 SRLQ86TD4 932 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 HORMAD1Q86X24 394 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 PLD5Q8N7P1 536 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 DEFB124Q8NES8 71 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 RNF25Q96BH1 459 aaPredicted RBP18.07■□□□□ 0.48
CLK4-211ENST00000522556 LRIG1Q96JA1 1093 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 CAMK1GQ96NX5 476 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 BAG1Q99933 345 aaPredicted RBP18.07■□□□□ 0.48
CLK4-211ENST00000522556 GAREM1Q9H706 876 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 TRIM10Q9UDY6 481 aa18.07■□□□□ 0.48
CLK4-211ENST00000522556 SPTBN2O15020 2390 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 AREL1O15033 823 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 SPOPO43791 374 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 TIMP2P16035 220 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 SERPINB6P35237 376 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 CTSKP43235 329 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 CLDN2P57739 230 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 IL9RQ01113 521 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 PPM1JQ5JR12 505 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 NAPEPLDQ6IQ20 393 aa18.06■□□□□ 0.48
CLK4-211ENST00000522556 MFSD7Q6UXD7 560 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms