RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 RALGPS1Q5JS13 557 aa24.45■■□□□ 1.51
PVT1-212ENST00000521951 PRPF39Q86UA1 669 aaKnown RBP24.45■■□□□ 1.51
PVT1-212ENST00000521951 SPEM1Q8N4L4 309 aa24.45■■□□□ 1.51
PVT1-212ENST00000521951 MMGT1Q8N4V1 131 aa24.45■■□□□ 1.51
PVT1-212ENST00000521951 SPATA22Q8NHS9 363 aa24.45■■□□□ 1.51
PVT1-212ENST00000521951 COL25A1Q9BXS0 654 aaPredicted RBP24.45■■□□□ 1.51
PVT1-212ENST00000521951 ZDHHC6Q9H6R6 413 aa24.45■■□□□ 1.51
PVT1-212ENST00000521951 ALOX15BO15296 676 aa24.45■■□□□ 1.5
PVT1-212ENST00000521951 CTSLP07711 333 aa24.45■■□□□ 1.5
PVT1-212ENST00000521951 CD86P42081 329 aa24.45■■□□□ 1.5
PVT1-212ENST00000521951 MAGEA9P43362 315 aa24.45■■□□□ 1.5
PVT1-212ENST00000521951 MAPK8P45983 427 aa24.45■■□□□ 1.5
PVT1-212ENST00000521951 CLCN5P51795 746 aa24.45■■□□□ 1.5
PVT1-212ENST00000521951 MRPS25P82663 173 aaKnown RBP24.45■■□□□ 1.5
PVT1-212ENST00000521951 C4orf22Q6V702 233 aa24.45■■□□□ 1.5
PVT1-212ENST00000521951 JAMLQ86YT9 394 aa24.45■■□□□ 1.5
PVT1-212ENST00000521951 TAB3Q8N5C8 712 aaPredicted RBP24.45■■□□□ 1.5
PVT1-212ENST00000521951 NOA1Q8NC60 698 aaKnown RBP24.45■■□□□ 1.5
PVT1-212ENST00000521951 PBXIP1Q96AQ6 731 aa24.45■■□□□ 1.5
PVT1-212ENST00000521951 RBM15Q96T37 977 aaKnown RBP eCLIP24.45■■□□□ 1.51e-8■■■■□ 25.4
PVT1-212ENST00000521951 GORASP1Q9BQQ3 440 aa24.45■■□□□ 1.5
PVT1-212ENST00000521951 CPEB1Q9BZB8 566 aaKnown RBP24.45■■□□□ 1.5
PVT1-212ENST00000521951 RRAGDQ9NQL2 400 aaPredicted RBP24.45■■□□□ 1.5
PVT1-212ENST00000521951 IL36AQ9UHA7 158 aa24.45■■□□□ 1.5
PVT1-212ENST00000521951 RAD51CO43502 376 aa24.44■■□□□ 1.5
PVT1-212ENST00000521951 VPS41P49754 854 aa24.44■■□□□ 1.5
PVT1-212ENST00000521951 COPAP53621 1224 aa24.44■■□□□ 1.5
PVT1-212ENST00000521951 SKOR1P84550 965 aa24.44■■□□□ 1.5
PVT1-212ENST00000521951 MTAPQ13126 283 aa24.44■■□□□ 1.5
PVT1-212ENST00000521951 PTK6Q13882 451 aa24.44■■□□□ 1.5
PVT1-212ENST00000521951 ARSIQ5FYB1 569 aa24.44■■□□□ 1.5
PVT1-212ENST00000521951 FAXCQ5TGI0 409 aa24.44■■□□□ 1.5
PVT1-212ENST00000521951 SYDE1Q6ZW31 735 aaPredicted RBP24.44■■□□□ 1.5
PVT1-212ENST00000521951 MAATS1Q7Z4T9 603 aa24.44■■□□□ 1.5
PVT1-212ENST00000521951 OR2T3Q8NH03 318 aa24.44■■□□□ 1.5
PVT1-212ENST00000521951 GRIN3AQ8TCU5 1115 aa24.44■■□□□ 1.5
PVT1-212ENST00000521951 TADA1Q96BN2 335 aa24.44■■□□□ 1.5
PVT1-212ENST00000521951 MUC3AQ02505 3323 aa24.43■■□□□ 1.5
PVT1-212ENST00000521951 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.43■■□□□ 1.5
PVT1-212ENST00000521951 LEFTY1O75610 366 aa24.43■■□□□ 1.5
PVT1-212ENST00000521951 MT-CYBP00156 380 aaPredicted RBP24.43■■□□□ 1.5
PVT1-212ENST00000521951 SERPINF2P08697 491 aa24.43■■□□□ 1.5
PVT1-212ENST00000521951 OXNAD1Q96HP4 312 aaPredicted RBP24.43■■□□□ 1.5
PVT1-212ENST00000521951 TUBGCP5Q96RT8 1024 aa24.43■■□□□ 1.5
PVT1-212ENST00000521951 IER2Q9BTL4 223 aa24.43■■□□□ 1.5
PVT1-212ENST00000521951 RSPH9Q9H1X1 276 aaPredicted RBP24.43■■□□□ 1.5
PVT1-212ENST00000521951 FBRSQ9HAH7 460 aa24.43■■□□□ 1.5
PVT1-212ENST00000521951 ETNK1Q9HBU6 452 aa24.43■■□□□ 1.5
PVT1-212ENST00000521951 UBP1Q9NZI7 540 aa24.43■■□□□ 1.5
PVT1-212ENST00000521951 SARDHQ9UL12 918 aa24.43■■□□□ 1.5
PVT1-212ENST00000521951 PPM1HQ9ULR3 514 aa24.43■■□□□ 1.5
PVT1-212ENST00000521951 PCDHGC4Q9Y5F7 938 aa24.43■■□□□ 1.5
PVT1-212ENST00000521951 PIGNO95427 931 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 PRNPP04156 253 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 FDFT1P37268 417 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 DGKEP52429 567 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 GPS1Q13098 491 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 PRPSAP1Q14558 356 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 GRM3Q14832 879 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 BMP8AQ7Z5Y6 402 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 DSG4Q86SJ6 1040 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 CAMK1DQ8IU85 385 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 MMAAQ8IVH4 418 aaKnown RBP24.42■■□□□ 1.5
PVT1-212ENST00000521951 LRRN4CLQ8ND94 238 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 TMIEQ8NEW7 156 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 PIP4K2CQ8TBX8 421 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 LRIG1Q96JA1 1093 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 TRIM51Q9BSJ1 452 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 MKRN2Q9H000 416 aaKnown RBP24.42■■□□□ 1.5
PVT1-212ENST00000521951 ATP13A3Q9H7F0 1226 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 RAB6BQ9NRW1 208 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 FAM153AQ9UHL3 310 aa24.42■■□□□ 1.5
PVT1-212ENST00000521951 FAM187AA6NFU0 413 aa24.41■■□□□ 1.5
PVT1-212ENST00000521951 ANXA9O76027 345 aa24.41■■□□□ 1.5
PVT1-212ENST00000521951 SLC34A2O95436 690 aa24.41■■□□□ 1.5
PVT1-212ENST00000521951 UGT2B4P06133 528 aa24.41■■□□□ 1.5
PVT1-212ENST00000521951 SATB1Q01826 763 aa24.41■■□□□ 1.5
PVT1-212ENST00000521951 BCL2L1Q07817 233 aa24.41■■□□□ 1.5
PVT1-212ENST00000521951 GDPD4Q6W3E5 623 aa24.41■■□□□ 1.5
PVT1-212ENST00000521951 LRRC1Q9BTT6 524 aa24.41■■□□□ 1.5
PVT1-212ENST00000521951 MLPHQ9BV36 600 aaPredicted RBP24.41■■□□□ 1.5
PVT1-212ENST00000521951 POLMQ9NP87 494 aaPredicted RBP24.41■■□□□ 1.5
PVT1-212ENST00000521951 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.4■■□□□ 1.5
PVT1-212ENST00000521951 TCRBV21S2A2A0A5A6 115 aa24.4■■□□□ 1.5
PVT1-212ENST00000521951 RNASEH1O60930 286 aaKnown RBP24.4■■□□□ 1.5
PVT1-212ENST00000521951 IL1BP01584 269 aa24.4■■□□□ 1.5
PVT1-212ENST00000521951 SERPINA4P29622 427 aa24.4■■□□□ 1.5
PVT1-212ENST00000521951 GEMP55040 296 aa24.4■■□□□ 1.5
PVT1-212ENST00000521951 RPS14P62263 151 aaKnown RBP24.4■■□□□ 1.5
PVT1-212ENST00000521951 TRAF2Q12933 501 aa24.4■■□□□ 1.5
PVT1-212ENST00000521951 SLC14A2Q15849 920 aa24.4■■□□□ 1.5
PVT1-212ENST00000521951 C8orf74Q6P047 294 aa24.4■■□□□ 1.5
PVT1-212ENST00000521951 KDELC1Q6UW63 502 aa24.4■■□□□ 1.5
PVT1-212ENST00000521951 TMPRSS6Q8IU80 811 aa24.4■■□□□ 1.5
PVT1-212ENST00000521951 KLHDC8BQ8IXV7 354 aa24.4■■□□□ 1.5
PVT1-212ENST00000521951 CCHCR1Q8TD31 782 aa24.4■■□□□ 1.5
PVT1-212ENST00000521951 SLC6A17Q9H1V8 727 aa24.4■■□□□ 1.5
PVT1-212ENST00000521951 SUV39H2Q9H5I1 410 aa24.4■■□□□ 1.5
PVT1-212ENST00000521951 VPS45Q9NRW7 570 aa24.4■■□□□ 1.5
PVT1-212ENST00000521951 ASIC3Q9UHC3 531 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms