RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 RENBPP51606 427 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 CCNHP51946 323 aaPredicted RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 RHOAP61586 193 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 NSUN2Q08J23 767 aaKnown RBP eCLIP7.38□□□□□ -1.23
GYPB-206ENST00000506516 GRM3Q14832 879 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 PAFAH1B3Q15102 231 aaKnown RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 CYTH1Q15438 398 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 CSRP2Q16527 193 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 MYLK3Q32MK0 819 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TMEM164Q5U3C3 297 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 DCAF12L1Q5VU92 463 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TBC1D3GQ6DHY5 549 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TBC1D3CQ6IPX1 549 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 DPY19L3Q6ZPD9 716 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 BZW1Q7L1Q6 419 aaKnown RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 ARMCX6Q7L4S7 300 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 VSIG1Q86XK7 387 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 SYT12Q8IV01 421 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TMEM139Q8IV31 216 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 ARHGAP12Q8IWW6 846 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TBC1D3Q8IZP1 549 aaPredicted RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 DCLK2Q8N568 766 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 C12orf50Q8NA57 414 aaPredicted RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 CHST14Q8NCH0 376 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 ACRBPQ8NEB7 543 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 OR2T34Q8NGX1 318 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 OR14C36Q8NHC7 312 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TPCN2Q8NHX9 752 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 PCDH19Q8TAB3 1148 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 KIAA1524Q8TCG1 905 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 RAPGEF5Q92565 580 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 HSPA12BQ96MM6 686 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 GDAP1L1Q96MZ0 367 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 ZNF599Q96NL3 588 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 RNF157Q96PX1 679 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 CINPQ9BW66 212 aaPredicted RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 OSBPL1AQ9BXW6 950 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TM6SF2Q9BZW4 377 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 KLC2Q9H0B6 622 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 NEUROG2Q9H2A3 272 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 CD93Q9NPY3 652 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 SEMA4GQ9NTN9 838 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 HAUS2Q9NVX0 235 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 SUSD2Q9UGT4 822 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 IPO11Q9UI26 975 aaKnown RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 SARDHQ9UL12 918 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 TPX2Q9ULW0 747 aaKnown RBP7.38□□□□□ -1.23
GYPB-206ENST00000506516 TFR2Q9UP52 801 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 ACTL7AQ9Y615 435 aa7.38□□□□□ -1.23
GYPB-206ENST00000506516 ATG2BQ96BY7 2078 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 MEI4A8MW99 385 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 PRR5-ARHGAP8B1AHC4 643 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 KRIT1O00522 736 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 PSTPIP1O43586 416 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 KRT86O43790 486 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 FSBPO95073 299 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 KRT1P04264 644 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 SDHBP21912 280 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 ITPKAP23677 461 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 CCNCP24863 283 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 CETN2P41208 172 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 CSNK1DP48730 415 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 CNTN1Q12860 1018 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 TFDP2Q14188 446 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 LBRQ14739 615 aaKnown RBP7.37□□□□□ -1.23
GYPB-206ENST00000506516 DUOXA1Q1HG43 343 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 MARC1Q5VT66 337 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 TIGD7Q6NT04 549 aaPredicted RBP7.37□□□□□ -1.23
GYPB-206ENST00000506516 C11orf63Q6NUN7 778 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 FBXL19Q6PCT2 694 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 GDPD4Q6W3E5 623 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 ERN2Q76MJ5 926 aaKnown RBP7.37□□□□□ -1.23
GYPB-206ENST00000506516 PRPF39Q86UA1 669 aaKnown RBP7.37□□□□□ -1.23
GYPB-206ENST00000506516 CPNE8Q86YQ8 564 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 SLC41A1Q8IVJ1 513 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 LRRC8AQ8IWT6 810 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 KIAA2013Q8IYS2 634 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 RCOR2Q8IZ40 523 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 SYCE1Q8N0S2 351 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 ATPAF2Q8N5M1 289 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 RNF10Q8N5U6 811 aaKnown RBP7.37□□□□□ -1.23
GYPB-206ENST00000506516 AADATQ8N5Z0 425 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 NPWQ8N729 165 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 NETO2Q8NC67 525 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 GRIN3AQ8TCU5 1115 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 HCAR2Q8TDS4 363 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 UBE2Q2Q8WVN8 375 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 DNASE2BQ8WZ79 361 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 FAF2Q96CS3 445 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 ZNF830Q96NB3 372 aaPredicted RBP7.37□□□□□ -1.23
GYPB-206ENST00000506516 NUSAP1Q9BXS6 441 aaKnown RBP7.37□□□□□ -1.23
GYPB-206ENST00000506516 HDAC8Q9BY41 377 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 TSGA10Q9BZW7 698 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 LACRTQ9GZZ8 138 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 C6orf106Q9H6K1 298 aaPredicted RBP7.37□□□□□ -1.23
GYPB-206ENST00000506516 ZDHHC6Q9H6R6 413 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 PDFQ9HBH1 243 aa7.37□□□□□ -1.23
GYPB-206ENST00000506516 ETNK2Q9NVF9 386 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms