RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 hCG_1809904A0A1W2PP81 198 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 A0A1W2PPE2 198 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 A0A1W2PR64 198 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 FAM86C2PA6NEL3 165 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 TMEM210A6NLX4 147 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 MIF4GDA9UHW6 222 aaKnown RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 E5RI56 91 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SOAT2O75908 522 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 KRT34O76011 436 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 RECQL5O94762 991 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 CYC1P08574 325 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 CAP2P40123 477 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 CDH11P55287 796 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 UBE2KP61086 200 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 LMAN2Q12907 356 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 FIGNQ5HY92 759 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 RPS26P11Q5JNZ5 115 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 LRIF1Q5T3J3 769 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 UBE2UQ5VVX9 321 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 LIPNQ5VXI9 398 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 KCNT2Q6UVM3 1135 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SLC36A4Q6YBV0 504 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 LDHAL6AQ6ZMR3 332 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 PTCHD4Q6ZW05 846 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 TMEM17Q86X19 198 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ZSCAN1Q8NBB4 408 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 RP9Q8TA86 221 aaKnown RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 TRIB2Q92519 343 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 GRAMD1AQ96CP6 724 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SLC25A36Q96CQ1 311 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 TCEAL4Q96EI5 215 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 MAGEB10Q96LZ2 347 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ADGRE3Q9BY15 652 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 DCLK3Q9C098 648 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 TFB2MQ9H5Q4 396 aaKnown RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SLA2Q9H6Q3 261 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 QTRT2Q9H974 415 aaKnown RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 LGR6Q9HBX8 967 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 MLXIPLQ9NP71 852 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 FAM53CQ9NYF3 392 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 PLEKHA6Q9Y2H5 1048 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SNCAIPQ9Y6H5 919 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 RTL9Q8NET4 1388 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 MLH3Q9UHC1 1453 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 G3V2T6 193 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 PPEF2O14830 753 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 UBOX5O94941 541 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 PLGP00747 810 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ELFN1P0C7U0 828 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 RBM34P42696 430 aaKnown RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 FOLH1Q04609 750 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 LAPTM5Q13571 262 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SGCAQ16586 387 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ME3Q16798 604 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ZNF829Q3KNS6 432 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ATG9BQ674R7 924 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 HGSNATQ68CP4 663 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 TATDN1Q6P1N9 297 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 INTS5Q6P9B9 1019 aaKnown RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 DPP9Q86TI2 863 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 CYP4Z1Q86W10 505 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 DCP2Q8IU60 420 aaKnown RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 MLKLQ8NB16 471 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SLC44A1Q8WWI5 657 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ZUFSPQ96AP4 578 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 USP21Q9UK80 565 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 NOD1Q9Y239 953 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 FKBP7Q9Y680 259 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SMIM30A4D0T7 59 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 KIAA0355O15063 1070 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 IL1BP01584 269 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 NUBP1P53384 320 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 RAD23AP54725 363 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 C19orf57Q0VDD7 668 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 BTN1A1Q13410 526 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 UBAP2Q5T6F2 1119 aaKnown RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ARHGAP40Q5TG30 622 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 HAUS6Q7Z4H7 955 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 C2CD5Q86YS7 1000 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ZNF614Q8N883 585 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 STAMQ92783 540 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 MAP6Q96JE9 813 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ACE2Q9BYF1 805 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 UPF3AQ9H1J1 476 aaKnown RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ELP3Q9H9T3 547 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 FAM207AQ9NSI2 230 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 GDAP2Q9NXN4 497 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 EIF3KQ9UBQ5 218 aaKnown RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 CAMK2AQ9UQM7 478 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 BTBD3Q9Y2F9 522 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 PCDH11XQ9BZA7 1347 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 PCDH11YQ9BZA8 1340 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 ABCC1P33527 1531 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 SAGE2PA6NJ88 616 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 SERPINB7O75635 380 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 HOXB1P14653 301 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 CRKLP46109 303 aaKnown RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 CASP6P55212 293 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 VSX2P58304 361 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 MPP2Q14168 576 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms