RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 VWA5B1Q5TIE3 1220 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 LYPLAL1Q5VWZ2 237 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 KLHDC10Q6PID8 442 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 ITIH6Q6UXX5 1313 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 CCDC73Q6ZRK6 1079 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 GAS2L3Q86XJ1 694 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 FAM217AQ8IXS0 508 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 FSTL5Q8N475 847 aaPredicted RBP7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 OR4D9Q8NGE8 314 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 MYCBPAPQ8TBZ2 947 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 EPS8L1Q8TE68 723 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 SECISBP2Q96T21 854 aaKnown RBP7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 APMAPQ9HDC9 416 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 FBXO8Q9NRD0 319 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 DDX19AQ9NUU7 478 aaKnown RBP7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 DNAJB12Q9NXW2 375 aaKnown RBP7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 DPP3Q9NY33 737 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 LRIT1Q9P2V4 623 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 TFIP11Q9UBB9 837 aaKnown RBP7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 SARDHQ9UL12 918 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 AGO1Q9UL18 857 aaKnown RBP7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 CDH9Q9ULB4 789 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 ZFR2Q9UPR6 939 aaKnown RBP7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 C2CD2Q9Y426 696 aa7.65□□□□□ -1.18
EXOSC3-206ENST00000489414 VWA3AA6NCI4 1184 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 CCDC169A6NNP5 214 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 MDM4O15151 490 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 RAD51BO15315 384 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 NUDT21O43809 227 aaKnown RBP7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 LMO2P25791 158 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 PNPLA4P41247 253 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 PTGIRP43119 386 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 SLC5A3P53794 718 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 DNASE1L3Q13609 305 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 ARHGEF7Q14155 803 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 HLTFQ14527 1009 aaKnown RBP eCLIP7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 LLGL1Q15334 1064 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 KYAT1Q16773 422 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 TMEM259Q4ZIN3 620 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 CES4AQ5XG92 561 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 SEL1L3Q68CR1 1132 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 ZPBP2Q6X784 338 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 FBXO18Q8NFZ0 1043 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 KCTD13Q8WZ19 329 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 TTC17Q96AE7 1141 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 SCARF2Q96GP6 870 aaPredicted RBP7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 LCORQ96JN0 433 aaPredicted RBP7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 NUP62CLQ9H1M0 184 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 TNMDQ9H2S6 317 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 ACTL8Q9H568 366 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 OSER1Q9NX31 292 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 HCFC1P51610 2035 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 LRP4O75096 1905 aa7.64□□□□□ -1.19
EXOSC3-206ENST00000489414 A6NL46 340 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 FOXO6A8MYZ6 492 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 PCDH17O14917 1159 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 ZNF185O15231 689 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 SHOX2O60902 331 aaPredicted RBP7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 DTNBO60941 627 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 TMEM63AO94886 807 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 ZWINTO95229 277 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 ALPIP09923 528 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 CD1CP29017 333 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 CORO1AP31146 461 aaKnown RBP7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 CD70P32970 193 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 ME1P48163 572 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 PEX3P56589 373 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 OR1D5P58170 312 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 PFN3P60673 137 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 GUCY1B3Q02153 619 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 CBLBQ13191 982 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 IL10RAQ13651 578 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 STK38Q15208 465 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 PIP5KL1Q5T9C9 394 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 FAM173BQ6P4H8 233 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 C6orf15Q6UXA7 325 aaPredicted RBP7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 CCDC117Q8IWD4 279 aaPredicted RBP7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 TOP6BLQ8N6T0 577 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 MCUQ8NE86 351 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 ARMC2Q8NEN0 867 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 CCDC148Q8NFR7 591 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 WFDC5Q8TCV5 224 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 RMND5BQ96G75 393 aaPredicted RBP7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 CGRRF1Q99675 332 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 PANK2Q9BZ23 570 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 ELOVL4Q9GZR5 314 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 GDAP2Q9NXN4 497 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 KCNN3Q9UGI6 736 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 ZNHIT2Q9UHR6 403 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 RCOR1Q9UKL0 485 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 EDARQ9UNE0 448 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 PIKFYVEQ9Y2I7 2098 aa7.63□□□□□ -1.19
EXOSC3-206ENST00000489414 TENM1Q9UKZ4 2725 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 M0QYT0 321 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 M0R2N6 131 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 ALX3O95076 343 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 YEATS4O95619 227 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 ASLP04424 464 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 SPATA31C1P0DKV0 1188 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 FDPSP14324 419 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms