RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, human

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-215	ENST00000488317	PRAME	P78395	509 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	ACVR2B	Q13705	512 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	SLC9C1	Q4G0N8	1177 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	DUSP28	Q4G0W2	176 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	SYTL3	Q4VX76	610 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	EARS2	Q5JPH6	523 aa	Known RBP	4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	MIS18BP1	Q6P0N0	1132 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	TMEM154	Q6P9G4	183 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	CMAS	Q8NFW8	434 aa	Predicted RBP	4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	RASSF8	Q8NHQ8	419 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	BCAS4	Q8TDM0	211 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	HDAC7	Q8WUI4	952 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	WDFY2	Q96P53	400 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	MXD3	Q9BW11	206 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	AAMDC	Q9H7C9	122 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	RRP7BP	Q9NSQ0	103 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	HAO1	Q9UJM8	370 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	RPS6KA6	Q9UK32	745 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	FAM96B	Q9Y3D0	163 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	SAMD9	Q5K651	1589 aa		4.98	□□□□□ -1.61
SRRM1-215	ENST00000488317	MST1R	Q04912	1400 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	CASKIN1	Q8WXD9	1431 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	DNMBP	Q6XZF7	1577 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	USP17L23	D6RBM5	183 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	BCAT2	O15382	392 aa	Predicted RBP	4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	GJB3	O75712	270 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	HEXA	P06865	529 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	CLTB	P09497	229 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	PTPN2	P17706	415 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	CDH2	P19022	906 aa	Predicted RBP	4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	EDN2	P20800	178 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	GCH1	P30793	250 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	GABRB2	P47870	512 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	CEBPZ	Q03701	1054 aa	Known RBP	4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	RNPS1	Q15287	305 aa	Known RBP	4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	ZNF280D	Q6N043	979 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	CES5A	Q6NT32	575 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	FAM57B	Q71RH2	274 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	TBC1D26	Q86UD7	250 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	LDLRAD3	Q86YD5	345 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	TDRP	Q86YL5	185 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	AMER2	Q8N7J2	671 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	LSMEM1	Q8N8F7	131 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	C8orf58	Q8NAV2	365 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	JAKMIP2	Q96AA8	810 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	SIN3A	Q96ST3	1273 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	MAP7D2	Q96T17	732 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	PIMREG	Q9BSJ6	248 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	POLR1B	Q9H9Y6	1135 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	NCKIPSD	Q9NZQ3	722 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	RAP2C	Q9Y3L5	183 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	ADAM18	Q9Y3Q7	739 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	EHBP1L1	Q8N3D4	1523 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	AKNA	Q7Z591	1439 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	ADGRF5	Q8IZF2	1346 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317	WDR17	Q8IZU2	1322 aa		4.97	□□□□□ -1.61
SRRM1-215	ENST00000488317		A0A096LPK6	155 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	LRRC3C	A6NJW4	275 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	AGAP14	A8MT82	685 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	FOXO6	A8MYZ6	492 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	RNMT	O43148	476 aa	Known RBP	4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	IGLV2-14	P01704	120 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	PCNA	P12004	261 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	TM4SF1	P30408	202 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	PTGER1	P34995	402 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	RFC1	P35251	1148 aa	Predicted RBP	4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	SLC16A2	P36021	539 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	PSMB10	P40306	273 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	FHL2	Q14192	279 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	ENTPD8	Q5MY95	495 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	TTC39A	Q5SRH9	613 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	TBC1D9B	Q66K14	1250 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	TXNDC8	Q6A555	127 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	ISM2	Q6H9L7	571 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	SARM1	Q6SZW1	724 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	TRIM74	Q86UV6	250 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	TRIM73	Q86UV7	250 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	ARHGAP12	Q8IWW6	846 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	FAM185A	Q8N0U4	392 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	ZCCHC9	Q8N567	271 aa	Known RBP	4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	NEK9	Q8TD19	979 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	TMEM170A	Q8WVE7	144 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	PSPC1	Q8WXF1	523 aa	Known RBP	4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	FEM1C	Q96JP0	617 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	SERINC2	Q96SA4	455 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	NCAPG	Q9BPX3	1015 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	KIF9	Q9HAQ2	790 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	SCPEP1	Q9HB40	452 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	SLC6A13	Q9NSD5	602 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	DLGAP2	Q9P1A6	1054 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	ZNHIT2	Q9UHR6	403 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	CARD8	Q9Y2G2	431 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	SNX8	Q9Y5X2	465 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	HFM1	A2PYH4	1435 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms