RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 SFT2D3Q587I9 215 aa12.46□□□□□ -0.41
PTCD2-204ENST00000486995 RNF220Q5VTB9 566 aa12.46□□□□□ -0.41
PTCD2-204ENST00000486995 ZNF470Q6ECI4 717 aa12.46□□□□□ -0.41
PTCD2-204ENST00000486995 KIAA0930Q6ICG6 404 aaPredicted RBP12.46□□□□□ -0.41
PTCD2-204ENST00000486995 TIGD7Q6NT04 549 aaPredicted RBP12.46□□□□□ -0.41
PTCD2-204ENST00000486995 ACAD11Q709F0 780 aa12.46□□□□□ -0.41
PTCD2-204ENST00000486995 DSELQ8IZU8 1212 aa12.46□□□□□ -0.41
PTCD2-204ENST00000486995 RTL3Q8N8U3 475 aaKnown RBP12.46□□□□□ -0.41
PTCD2-204ENST00000486995 KDM1BQ8NB78 822 aa12.46□□□□□ -0.41
PTCD2-204ENST00000486995 PDCD6IPQ8WUM4 868 aaKnown RBP12.46□□□□□ -0.41
PTCD2-204ENST00000486995 HEXDCQ8WVB3 486 aa12.46□□□□□ -0.41
PTCD2-204ENST00000486995 PPP2R3CQ969Q6 453 aa12.46□□□□□ -0.41
PTCD2-204ENST00000486995 ELMO2Q96JJ3 720 aa12.46□□□□□ -0.41
PTCD2-204ENST00000486995 DDX50Q9BQ39 737 aaKnown RBP12.46□□□□□ -0.41
PTCD2-204ENST00000486995 MRPL46Q9H2W6 279 aaKnown RBP12.46□□□□□ -0.41
PTCD2-204ENST00000486995 OSER1Q9NX31 292 aa12.46□□□□□ -0.41
PTCD2-204ENST00000486995 CDYLQ9Y232 598 aa12.46□□□□□ -0.41
PTCD2-204ENST00000486995 SLC22A2O15244 555 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 MOCS2O96007 188 aaPredicted RBP12.46□□□□□ -0.42
PTCD2-204ENST00000486995 PEX11BO96011 259 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 RAG1P15918 1043 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 CD151P48509 253 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 RAB27AP51159 221 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 MLLT6P55198 1093 aaPredicted RBP12.46□□□□□ -0.42
PTCD2-204ENST00000486995 TSPY1Q01534 308 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 CYLC2Q14093 348 aaPredicted RBP12.46□□□□□ -0.42
PTCD2-204ENST00000486995 NOMO2Q5JPE7 1267 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 ZNF280DQ6N043 979 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 SPATA2LQ8IUW3 424 aaPredicted RBP12.46□□□□□ -0.42
PTCD2-204ENST00000486995 SPNS2Q8IVW8 549 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 KYQ8NBH2 561 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 GDPD5Q8WTR4 605 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 SOCS4Q8WXH5 440 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 SUSD3Q96L08 255 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 PPP1R2P1Q96PQ5 205 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 MRPL57Q9BQC6 102 aaKnown RBP12.46□□□□□ -0.42
PTCD2-204ENST00000486995 CCDC28BQ9BUN5 200 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 NOL6Q9H6R4 1146 aaKnown RBP12.46□□□□□ -0.42
PTCD2-204ENST00000486995 STK39Q9UEW8 545 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 IPO11Q9UI26 975 aaKnown RBP12.46□□□□□ -0.42
PTCD2-204ENST00000486995 FBXO5Q9UKT4 447 aa12.46□□□□□ -0.42
PTCD2-204ENST00000486995 A0A1W2PQH9 124 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 TMEM233B4DJY2 109 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 TNPO2O14787 897 aaKnown RBP12.45□□□□□ -0.42
PTCD2-204ENST00000486995 OR4Q2P0C623 313 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 PAMP19021 973 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 PEX2P28328 305 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 CTGFP29279 349 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 ADSLP30566 484 aaPredicted RBP12.45□□□□□ -0.42
PTCD2-204ENST00000486995 WNT3AP56704 352 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 MSLNQ13421 630 aaPredicted RBP12.45□□□□□ -0.42
PTCD2-204ENST00000486995 ZNF789Q5FWF6 425 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 NEPROQ6NW34 567 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 CNSTQ6PJW8 725 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 KDELC1Q6UW63 502 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 CCNYL1Q8N7R7 359 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 TXNDC5Q8NBS9 432 aaKnown RBP12.45□□□□□ -0.42
PTCD2-204ENST00000486995 CATSPER2Q96P56 530 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 ADAM2Q99965 735 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 KLHL4Q9C0H6 718 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 SLC24A3Q9HC58 644 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 IGSF5Q9NSI5 407 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 PRPF19Q9UMS4 504 aaKnown RBP12.45□□□□□ -0.42
PTCD2-204ENST00000486995 A0A087X1B8 175 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 NPHS1O60500 1241 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 HUNKP57058 714 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 POU4F1Q01851 419 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 NRG1Q02297 640 aaPredicted RBP12.45□□□□□ -0.42
PTCD2-204ENST00000486995 SEPT6Q14141 434 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 PDCD2Q16342 344 aaPredicted RBP12.45□□□□□ -0.42
PTCD2-204ENST00000486995 PCSK7Q16549 785 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 RBM20Q5T481 1227 aaKnown RBP12.45□□□□□ -0.42
PTCD2-204ENST00000486995 FOXB2Q5VYV0 432 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 NXNQ6DKJ4 435 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 C16orf89Q6UX73 402 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 LRRC49Q8IUZ0 686 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 SGF29Q96ES7 293 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 CDRT15Q96T59 188 aa12.45□□□□□ -0.42
PTCD2-204ENST00000486995 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.45□□□□□ -0.42
PTCD2-204ENST00000486995 WASH4PA8MWX3 477 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 CASQ2O14958 399 aaPredicted RBP12.44□□□□□ -0.42
PTCD2-204ENST00000486995 RNASEH1O60930 286 aaKnown RBP12.44□□□□□ -0.42
PTCD2-204ENST00000486995 ZCCHC18P0CG32 403 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 TYMPP19971 482 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 PEX19P40855 299 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 DNAJB13P59910 316 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 LPIN1Q14693 890 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 PIK3R6Q5UE93 754 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 TRIM67Q6ZTA4 783 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 RCN3Q96D15 328 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 MAELQ96JY0 434 aaKnown RBP12.44□□□□□ -0.42
PTCD2-204ENST00000486995 MARK4Q96L34 752 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 C1orf74Q96LT6 269 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 TUBGCP5Q96RT8 1024 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 PRKD2Q9BZL6 878 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 SLC25A51Q9H1U9 297 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 ARNT2Q9HBZ2 717 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 ZBTB26Q9HCK0 441 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 ATP13A1Q9HD20 1204 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 TBC1D13Q9NVG8 400 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms