RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 FAM159BA6NKW6 160 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 J3KR12 359 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 ALDH1A2O94788 518 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 PRAMEF12O95522 483 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 C1QAP02745 245 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 GNA12Q03113 381 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 ZNF177Q13360 481 aaPredicted RBP14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 MPP3Q13368 585 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 SPANXN3Q5MJ09 141 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 TTC19Q6DKK2 380 aaPredicted RBP14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 SETD3Q86TU7 594 aaPredicted RBP14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 CTAGE3PQ8IX95 158 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 CELF5Q8N6W0 485 aaKnown RBP14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 ARL14EPQ8N8R7 260 aaPredicted RBP14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 CDKL2Q92772 493 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 PRICKLE1Q96MT3 831 aaPredicted RBP14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 LRRC3BQ96PB8 259 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 SMC6Q96SB8 1091 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 TBL1YQ9BQ87 522 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 IL22Q9GZX6 179 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 TBC1D17Q9HA65 648 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 PLAC1Q9HBJ0 212 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 KCNK9Q9NPC2 374 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 TDP1Q9NUW8 608 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 INTS9Q9NV88 658 aaKnown RBP14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 SMPD4Q9NXE4 827 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 MOCS1Q9NZB8 636 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 UBP1Q9NZI7 540 aa14.8□□□□□ -0.04
POLR2J3-204ENST00000486319 TRAV19A0A0A6YYK7 116 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 TMEM120BA0PK00 339 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 ILVBLA1L0T0 632 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 TYW5A2RUC4 315 aaKnown RBP14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 PRAMEF11O60813 436 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 USP12O75317 370 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 SLC7A9P82251 487 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 PRKCQQ04759 706 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 SLC10A7Q0GE19 358 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 FCHO2Q0JRZ9 810 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 NAB1Q13506 487 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 MLF2Q15773 248 aaPredicted RBP14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 IER5LQ5T953 404 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 TMCO4Q5TGY1 634 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 ZNF449Q6P9G9 518 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 ZNF771Q7L3S4 317 aaPredicted RBP14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 PRPF39Q86UA1 669 aaKnown RBP14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 CCDC117Q8IWD4 279 aaPredicted RBP14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 BBS5Q8N3I7 341 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 PPM1NQ8N819 430 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 SPATA22Q8NHS9 363 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 MDM1Q8TC05 714 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 BPIFB1Q8TDL5 484 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 DNASE1L2Q92874 299 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 USP13Q92995 863 aaPredicted RBP14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 ZNF419Q96HQ0 510 aaPredicted RBP14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 SLC22A12Q96S37 553 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 CYP2S1Q96SQ9 504 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 TRABDQ9H4I3 376 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 SSU72Q9NP77 194 aaKnown RBP14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 HEBP1Q9NRV9 189 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 VPS45Q9NRW7 570 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 THG1LQ9NWX6 298 aaKnown RBP14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 LSM7Q9UK45 103 aaKnown RBP14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 ZNF510Q9Y2H8 683 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 CPQQ9Y646 472 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 ZDBF2Q9HCK1 2354 aa14.79□□□□□ -0.04
POLR2J3-204ENST00000486319 USP1O94782 785 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 MT-CYBP00156 380 aaPredicted RBP14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 CKMP06732 381 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 RHOCP08134 193 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 CREB1P16220 341 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 AOC1P19801 751 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 ACVRL1P37023 503 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 ETFBP38117 255 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 SLC18A1P54219 525 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 STARD6P59095 220 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 RPS24P62847 133 aaKnown RBP14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 CRADDP78560 199 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 OLIG2Q13516 323 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 FRG1Q14331 258 aaKnown RBP14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 LBRQ14739 615 aaKnown RBP14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 CRYMQ14894 314 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 ARMC3Q5W041 872 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 CWF19L1Q69YN2 538 aaKnown RBP14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 ZNF783Q6ZMS7 281 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 TMEM105Q8N8V8 129 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 ALKBH8Q96BT7 664 aaKnown RBP14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 IMP4Q96G21 291 aaKnown RBP14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 FSD1LQ9BXM9 530 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 NT5MQ9NPB1 228 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 TRPV5Q9NQA5 729 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 PIH1D1Q9NWS0 290 aaKnown RBP14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 NKIRAS1Q9NYS0 192 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 SMG5Q9UPR3 1016 aaKnown RBP14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 CCL26Q9Y258 94 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 TBC1D30Q9Y2I9 924 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 RPS6KL1Q9Y6S9 549 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 WDFY4Q6ZS81 3184 aa14.78□□□□□ -0.04
POLR2J3-204ENST00000486319 MYLKQ15746 1914 aa14.77□□□□□ -0.04
POLR2J3-204ENST00000486319 FAM237BA0A1B0GVD1 139 aa14.77□□□□□ -0.04
POLR2J3-204ENST00000486319 PRPF4O43172 522 aaKnown RBP eCLIP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms