RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 LBX1P52954 281 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 SP2Q02086 613 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 CXCL9Q07325 125 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 PCOLCEQ15113 449 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 PDK1Q15118 436 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 GLE1Q53GS7 698 aaKnown RBP3.44□□□□□ -1.86
SMC6-208ENST00000481708 KCNT1Q5JUK3 1230 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 STRIP1Q5VSL9 837 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 USP17L6PQ6QN14 398 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 ZNF572Q7Z3I7 529 aaPredicted RBP3.44□□□□□ -1.86
SMC6-208ENST00000481708 GAS2L3Q86XJ1 694 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 PEX5LQ8IYB4 626 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 FAM185AQ8N0U4 392 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 TRIML1Q8N9V2 468 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 FAM46DQ8NEK8 389 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 DBF4BQ8NFT6 615 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 CPT1BQ92523 772 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 INTS12Q96CB8 462 aaKnown RBP3.44□□□□□ -1.86
SMC6-208ENST00000481708 TLR10Q9BXR5 811 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 TRIM5Q9C035 493 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 GPR88Q9GZN0 384 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 SMOC2Q9H3U7 446 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 MANSC1Q9H8J5 431 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 DDX43Q9NXZ2 648 aaKnown RBP3.44□□□□□ -1.86
SMC6-208ENST00000481708 GALNT8Q9NY28 637 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 ZNF70Q9UC06 446 aaPredicted RBP3.44□□□□□ -1.86
SMC6-208ENST00000481708 CD207Q9UJ71 328 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 ADAMTS6Q9UKP5 1117 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 CDYLQ9Y232 598 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 PCDHA10Q9Y5I2 948 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 NFS1Q9Y697 457 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 NDC80O14777 642 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 PLRG1O43660 514 aaKnown RBP3.44□□□□□ -1.86
SMC6-208ENST00000481708 PAGE4O60829 102 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 COQ9O75208 318 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 PENKP01210 267 aaPredicted RBP3.44□□□□□ -1.86
SMC6-208ENST00000481708 RPLP2P05387 115 aaKnown RBP3.44□□□□□ -1.86
SMC6-208ENST00000481708 HEXBP07686 556 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 TPH1P17752 444 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 KIR2DL1P43626 348 aaPredicted RBP3.44□□□□□ -1.86
SMC6-208ENST00000481708 KIR2DL2P43627 348 aaPredicted RBP3.44□□□□□ -1.86
SMC6-208ENST00000481708 PDE1AP54750 535 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 EPHB4P54760 987 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 POLE2P56282 527 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 TCF15Q12870 199 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 KLF10Q13118 480 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 RUNX2Q13950 521 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 C9orf152Q5JTZ5 239 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 PI4KAP1Q8N8J0 262 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 NPIPB3Q92617 1050 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 CYFIP2Q96F07 1278 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 KLHL32Q96NJ5 620 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 C1orf21Q9H246 121 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 CD93Q9NPY3 652 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 DDX18Q9NVP1 670 aaKnown RBP3.44□□□□□ -1.86
SMC6-208ENST00000481708 CRNNQ9UBG3 495 aaPredicted RBP3.44□□□□□ -1.86
SMC6-208ENST00000481708 LIMA1Q9UHB6 759 aaKnown RBP3.44□□□□□ -1.86
SMC6-208ENST00000481708 CNOT7Q9UIV1 285 aaKnown RBP3.44□□□□□ -1.86
SMC6-208ENST00000481708 RPH3AQ9Y2J0 694 aaPredicted RBP3.44□□□□□ -1.86
SMC6-208ENST00000481708 AP1M2Q9Y6Q5 423 aa3.44□□□□□ -1.86
SMC6-208ENST00000481708 CHD5Q8TDI0 1954 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 BAZ2AQ9UIF9 1905 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 A0A0A6YYC8 382 aaPredicted RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 GXYLT2A0PJZ3 443 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 I3L1I5 382 aaPredicted RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 PSPNO60542 156 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 PRDM1O75626 825 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 FURINP09958 794 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 CHRM3P20309 590 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 ADCY8P40145 1251 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 CAPZA2P47755 286 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 PIP4K2AP48426 406 aaPredicted RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 HK2P52789 917 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 RARSP54136 660 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 HLFQ16534 295 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 GLRA4Q5JXX5 417 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 SPDYAQ5MJ70 313 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 CCDC183Q5T5S1 534 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 SUSD4Q5VX71 490 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 ANKS6Q68DC2 871 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 ZYG11AQ6WRX3 759 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 INTS8Q75QN2 995 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 MMP21Q8N119 569 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 NSUN7Q8NE18 718 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 PHOSPHO1Q8TCT1 267 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 PRPF31Q8WWY3 499 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 HSPH1Q92598 858 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 ELMOD3Q96FG2 381 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 PRRX2Q99811 253 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 SLC46A2Q9BY10 475 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 TTC12Q9H892 705 aaPredicted RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 PAPOLBQ9NRJ5 636 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 LANCL2Q9NS86 450 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 ZBTB40Q9NUA8 1239 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 POLLQ9UGP5 575 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 NENFQ9UMX5 172 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 LIPT1Q9Y234 373 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 CLCA3PQ9Y6N3 262 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 C2orf81A6NN90 581 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 ADAMTS4O75173 837 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms