RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 CNOT1A5YKK6 2376 aaKnown RBP15.8■□□□□ 0.12
HMGA1-206ENST00000478214 MUSKO15146 869 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 MFSD11O43934 449 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 MAFKO60675 156 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 PCDH8O95206 1070 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 PEX11BO96011 259 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 WNT1P04628 370 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 KDELR1P24390 212 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 ABL2P42684 1182 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 SLC10A7Q0GE19 358 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 RFTN1Q14699 578 aaPredicted RBP15.79■□□□□ 0.12
HMGA1-206ENST00000478214 TMCO4Q5TGY1 634 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 NCBP2-AS2Q69YL0 99 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 NEK5Q6P3R8 708 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 ADAT2Q7Z6V5 191 aaKnown RBP15.79■□□□□ 0.12
HMGA1-206ENST00000478214 HORMAD1Q86X24 394 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 ATPAF2Q8N5M1 289 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 PQLC3Q8N755 202 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 FAF2Q96CS3 445 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 ZNF599Q96NL3 588 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 CINPQ9BW66 212 aaPredicted RBP15.79■□□□□ 0.12
HMGA1-206ENST00000478214 CPEB1Q9BZB8 566 aaKnown RBP15.79■□□□□ 0.12
HMGA1-206ENST00000478214 IL21RQ9HBE5 538 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 AASDHPPTQ9NRN7 309 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 DNAAF2Q9NVR5 837 aaKnown RBP15.79■□□□□ 0.12
HMGA1-206ENST00000478214 ZFR2Q9UPR6 939 aaKnown RBP15.79■□□□□ 0.12
HMGA1-206ENST00000478214 ANKRD6Q9Y2G4 727 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 SNX11Q9Y5W9 270 aa15.79■□□□□ 0.12
HMGA1-206ENST00000478214 A0A1W2PR77 199 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 LRRD1A4D1F6 860 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 RCCD1A6NED2 376 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 SLC31A1O15431 190 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 BUB1BO60566 1050 aaPredicted RBP15.78■□□□□ 0.12
HMGA1-206ENST00000478214 OPHN1O60890 802 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 GJB3O75712 270 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 MAP3K6O95382 1288 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 PIGNO95427 931 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 TNNT1P13805 278 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 PRLRP16471 622 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 COMTP21964 271 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 CD38P28907 300 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 SLC1A1P43005 524 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 HADHBP55084 474 aaKnown RBP15.78■□□□□ 0.12
HMGA1-206ENST00000478214 LBRQ14739 615 aaKnown RBP15.78■□□□□ 0.12
HMGA1-206ENST00000478214 PAFAH1B3Q15102 231 aaKnown RBP15.78■□□□□ 0.12
HMGA1-206ENST00000478214 ZNF284Q2VY69 593 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 HLA-BQ31612 363 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 SETMARQ53H47 684 aaPredicted RBP15.78■□□□□ 0.12
HMGA1-206ENST00000478214 LRRC73Q5JTD7 316 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 LRRC38Q5VT99 294 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 SEL1L3Q68CR1 1132 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 NAPEPLDQ6IQ20 393 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 SRLQ86TD4 932 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 BAG1Q99933 345 aaPredicted RBP15.78■□□□□ 0.12
HMGA1-206ENST00000478214 GOLPH3Q9H4A6 298 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 GAREM1Q9H706 876 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 LUC7LQ9NQ29 371 aaKnown RBP15.78■□□□□ 0.12
HMGA1-206ENST00000478214 IMPACTQ9P2X3 320 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 SEPT3Q9UH03 358 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 GGT7Q9UJ14 662 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 DMTF1Q9Y222 760 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 ITM2BQ9Y287 266 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 REXO2Q9Y3B8 237 aaKnown RBP15.78■□□□□ 0.12
HMGA1-206ENST00000478214 ADAMTS9Q9P2N4 1935 aa15.78■□□□□ 0.12
HMGA1-206ENST00000478214 C3orf70A6NLC5 250 aaPredicted RBP15.77■□□□□ 0.12
HMGA1-206ENST00000478214 KCNK3O14649 394 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 VILLO15195 856 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 SPINT1O43278 529 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 AP1G1O43747 822 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 SPOPO43791 374 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 KRT1P04264 644 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 TIMP2P16035 220 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 KCNA4P22459 653 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 NUDT1P36639 197 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 CTSKP43235 329 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 CSNK1DP48730 415 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 C21orf59P57076 290 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 TMEM259Q4ZIN3 620 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 PPM1JQ5JR12 505 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 IL27RAQ6UWB1 636 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 ERMP1Q7Z2K6 904 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 TTC7BQ86TV6 843 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 CAMK1DQ8IU85 385 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 TMEM139Q8IV31 216 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 RHOT1Q8IXI2 618 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 ACRBPQ8NEB7 543 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 RAB7BQ96AH8 199 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 RNF157Q96PX1 679 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 PSKH2Q96QS6 385 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 MYOCQ99972 504 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 SUV39H2Q9H5I1 410 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 DKK3Q9UBP4 350 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 SALL4Q9UJQ4 1053 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 CA5BQ9Y2D0 317 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 FNDC3AQ9Y2H6 1198 aaKnown RBP15.77■□□□□ 0.12
HMGA1-206ENST00000478214 ALG6Q9Y672 507 aa15.77■□□□□ 0.12
HMGA1-206ENST00000478214 ASCC3Q8N3C0 2202 aaKnown RBP15.77■□□□□ 0.12
HMGA1-206ENST00000478214 A0A0A6YYK5 440 aaPredicted RBP15.76■□□□□ 0.11
HMGA1-206ENST00000478214 TTC24A2A3L6 582 aaPredicted RBP15.76■□□□□ 0.11
HMGA1-206ENST00000478214 PRAMEF26H0Y7S4 382 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms