RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 MAPK8P45983 427 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 CXCL12P48061 93 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 AP1S1P61966 158 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 DSC2Q02487 901 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 TEX44Q53QW1 395 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 ZNF776Q68DI1 518 aaPredicted RBP15.52■□□□□ 0.08
SEC13-215ENST00000477547 ANO7Q6IWH7 933 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 ZNF567Q8N184 647 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 CNTD1Q8N815 330 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 HMGB4Q8WW32 186 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 RUBCNQ92622 972 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 MAGOHBQ96A72 148 aaKnown RBP15.52■□□□□ 0.08
SEC13-215ENST00000477547 SPATA13Q96N96 652 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 NUDCD1Q96RS6 583 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 SEMA3CQ99985 751 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 SLC6A17Q9H1V8 727 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 RSPH9Q9H1X1 276 aaPredicted RBP15.52■□□□□ 0.08
SEC13-215ENST00000477547 SCUBE2Q9NQ36 999 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 PRMT8Q9NR22 394 aaPredicted RBP15.52■□□□□ 0.08
SEC13-215ENST00000477547 BCCIPQ9P287 314 aaKnown RBP eCLIP15.52■□□□□ 0.08
SEC13-215ENST00000477547 IL36AQ9UHA7 158 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 ATP8A1Q9Y2Q0 1164 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 CEP192Q8TEP8 1941 aa15.52■□□□□ 0.07
SEC13-215ENST00000477547 C1QTNF3-AMACRE9PGA6 284 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 INSIG1O15503 277 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 ZBTB24O43167 697 aaPredicted RBP15.51■□□□□ 0.07
SEC13-215ENST00000477547 RNASEH1O60930 286 aaKnown RBP15.51■□□□□ 0.07
SEC13-215ENST00000477547 ALDH1A2O94788 518 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 APBB3O95704 486 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 IFNB1P01574 187 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 PRNPP04156 253 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 SP9P0CG40 484 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 GABRG2P18507 467 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 NDUFV2P19404 249 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 NFKB1P19838 968 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 CR2P20023 1033 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 GKP32189 559 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 CHRNA3P32297 505 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 KCNJ1P48048 391 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 FNTAP49354 379 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 SCNN1BP51168 640 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 COPAP53621 1224 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 RAD51Q06609 339 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 ALG1LQ6GMV1 187 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 ITPRIPL1Q6GPH6 555 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 TTC27Q6P3X3 843 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 KIAA1324Q6UXG2 1013 aaKnown RBP15.51■□□□□ 0.07
SEC13-215ENST00000477547 SRLQ86TD4 932 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 MMAAQ8IVH4 418 aaKnown RBP15.51■□□□□ 0.07
SEC13-215ENST00000477547 PLPP6Q8IY26 295 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 CCDC89Q8N998 374 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 CCDC110Q8TBZ0 833 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 TEKT5Q96M29 485 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 HEPHQ9BQS7 1158 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 MKRN2Q9H000 416 aaKnown RBP15.51■□□□□ 0.07
SEC13-215ENST00000477547 DDX47Q9H0S4 455 aaKnown RBP15.51■□□□□ 0.07
SEC13-215ENST00000477547 GBA3Q9H227 469 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 USP29Q9HBJ7 922 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 RSPH14Q9UHP6 348 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 TRHDEQ9UKU6 1024 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 MRFAP1Q9Y605 127 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 WASF2Q9Y6W5 498 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 FANCMQ8IYD8 2048 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 SPTBN2O15020 2390 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 ZFHX4Q86UP3 3567 aa15.51■□□□□ 0.07
SEC13-215ENST00000477547 LRRK1Q38SD2 2015 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 TTC24A2A3L6 582 aaPredicted RBP15.5■□□□□ 0.07
SEC13-215ENST00000477547 F5H423 210 aaPredicted RBP15.5■□□□□ 0.07
SEC13-215ENST00000477547 CCDC188H7C350 402 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 KPNA3O00505 521 aaPredicted RBP15.5■□□□□ 0.07
SEC13-215ENST00000477547 LAMTOR5O43504 91 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 OPHN1O60890 802 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 LEFTY1O75610 366 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 PAPSS2O95340 614 aaPredicted RBP15.5■□□□□ 0.07
SEC13-215ENST00000477547 PIGNO95427 931 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 ADH1BP00325 375 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 IL1BP01584 269 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 UGT2B4P06133 528 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 CTSLP07711 333 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 COILP38432 576 aaPredicted RBP15.5■□□□□ 0.07
SEC13-215ENST00000477547 CSNK1DP48730 415 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 NUMA1Q14980 2115 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 CST6Q15828 149 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 WHAMMP3Q1A5X7 153 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 MYLK3Q32MK0 819 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 RALGPS1Q5JS13 557 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 DNTTIP2Q5QJE6 756 aaKnown RBP15.5■□□□□ 0.07
SEC13-215ENST00000477547 ANKRD20A2Q5SQ80 823 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 ANKRD20A1Q5TYW2 823 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 ANKRD20A3Q5VUR7 823 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 CCDC137Q6PK04 289 aaKnown RBP15.5■□□□□ 0.07
SEC13-215ENST00000477547 ARHGEF18Q6ZSZ5 1173 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 GSTA5Q7RTV2 222 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 PID1Q7Z2X4 250 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 PGBD3Q8N328 593 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 MDGA1Q8NFP4 955 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 PIP4K2CQ8TBX8 421 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 RTP4Q96DX8 246 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 TUBGCP5Q96RT8 1024 aa15.5■□□□□ 0.07
SEC13-215ENST00000477547 FAM129BQ96TA1 746 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms