RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 RAD51Q06609 339 aa21.86■■□□□ 1.09
CPNE1-220ENST00000458038 MYLK3Q32MK0 819 aa21.86■■□□□ 1.09
CPNE1-220ENST00000458038 DPCR1Q3MIW9 517 aa21.86■■□□□ 1.09
CPNE1-220ENST00000458038 TCP11X2Q5H9J9 407 aa21.86■■□□□ 1.09
CPNE1-220ENST00000458038 TRIM72Q6ZMU5 477 aa21.86■■□□□ 1.09
CPNE1-220ENST00000458038 RXFP2Q8WXD0 754 aa21.86■■□□□ 1.09
CPNE1-220ENST00000458038 CASKIN2Q8WXE0 1202 aa21.86■■□□□ 1.09
CPNE1-220ENST00000458038 DAAM1Q9Y4D1 1078 aa21.86■■□□□ 1.09
CPNE1-220ENST00000458038 SETXQ7Z333 2677 aaKnown RBP21.85■■□□□ 1.09
CPNE1-220ENST00000458038 EME2A4GXA9 379 aaPredicted RBP21.85■■□□□ 1.09
CPNE1-220ENST00000458038 ERVH48-1M5A8F1 160 aa21.85■■□□□ 1.09
CPNE1-220ENST00000458038 KRIT1O00522 736 aa21.85■■□□□ 1.09
CPNE1-220ENST00000458038 RAMP2O60895 175 aa21.85■■□□□ 1.09
CPNE1-220ENST00000458038 CYP1A1P04798 512 aaPredicted RBP21.85■■□□□ 1.09
CPNE1-220ENST00000458038 THOP1P52888 689 aa21.85■■□□□ 1.09
CPNE1-220ENST00000458038 TMPRSS3P57727 454 aa21.85■■□□□ 1.09
CPNE1-220ENST00000458038 CXADRP78310 365 aa21.85■■□□□ 1.09
CPNE1-220ENST00000458038 NR0B2Q15466 257 aa21.85■■□□□ 1.09
CPNE1-220ENST00000458038 ISXQ2M1V0 245 aa21.85■■□□□ 1.09
CPNE1-220ENST00000458038 CCDC14Q49A88 953 aa21.85■■□□□ 1.09
CPNE1-220ENST00000458038 EMC1Q8N766 993 aa21.85■■□□□ 1.09
CPNE1-220ENST00000458038 CENPIQ92674 756 aaPredicted RBP21.85■■□□□ 1.09
CPNE1-220ENST00000458038 CENPTQ96BT3 561 aa21.85■■□□□ 1.09
CPNE1-220ENST00000458038 TBC1D31Q96DN5 1066 aa21.85■■□□□ 1.09
CPNE1-220ENST00000458038 WBP1Q96G27 269 aa21.85■■□□□ 1.09
CPNE1-220ENST00000458038 DNAI1Q9UI46 699 aa21.85■■□□□ 1.09
CPNE1-220ENST00000458038 NOCTQ9UK39 431 aaKnown RBP21.85■■□□□ 1.09
CPNE1-220ENST00000458038 ZNF462Q96JM2 2506 aa21.84■■□□□ 1.09
CPNE1-220ENST00000458038 C2CD4BA6NLJ0 364 aa21.84■■□□□ 1.09
CPNE1-220ENST00000458038 AREL1O15033 823 aa21.84■■□□□ 1.09
CPNE1-220ENST00000458038 KDELR3O43731 214 aa21.84■■□□□ 1.09
CPNE1-220ENST00000458038 TCEA3O75764 348 aa21.84■■□□□ 1.09
CPNE1-220ENST00000458038 PLEKP08567 350 aaPredicted RBP21.84■■□□□ 1.09
CPNE1-220ENST00000458038 ABL2P42684 1182 aa21.84■■□□□ 1.09
CPNE1-220ENST00000458038 RHDQ02161 417 aa21.84■■□□□ 1.09
CPNE1-220ENST00000458038 CDO1Q16878 200 aa21.84■■□□□ 1.09
CPNE1-220ENST00000458038 HSP90AA4PQ58FG1 418 aa21.84■■□□□ 1.09
CPNE1-220ENST00000458038 GDPD4Q6W3E5 623 aa21.84■■□□□ 1.09
CPNE1-220ENST00000458038 TTC7BQ86TV6 843 aa21.84■■□□□ 1.09
CPNE1-220ENST00000458038 LMX1AQ8TE12 382 aa21.84■■□□□ 1.09
CPNE1-220ENST00000458038 NAT6Q93015 286 aa21.84■■□□□ 1.09
CPNE1-220ENST00000458038 CCDC97Q96F63 343 aaPredicted RBP21.84■■□□□ 1.09
CPNE1-220ENST00000458038 NDFIP2Q9NV92 336 aa21.84■■□□□ 1.09
CPNE1-220ENST00000458038 KLF15Q9UIH9 416 aa21.84■■□□□ 1.09
CPNE1-220ENST00000458038 CPED1A4D0V7 1026 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 LMO7DNF2Z398 122 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 LRIG2O94898 1065 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 PRB1P04280 392 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 UGT2B4P06133 528 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 TPM2P07951 284 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 MYF5P13349 255 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 SUOXP51687 545 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 EIF2B5Q13144 721 aaKnown RBP21.83■■□□□ 1.09
CPNE1-220ENST00000458038 CDKN3Q16667 212 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 C15orf59Q2T9L4 293 aaPredicted RBP21.83■■□□□ 1.09
CPNE1-220ENST00000458038 INO80DQ53TQ3 878 aaPredicted RBP21.83■■□□□ 1.09
CPNE1-220ENST00000458038 EFL1Q7Z2Z2 1120 aaKnown RBP21.83■■□□□ 1.09
CPNE1-220ENST00000458038 KCNE4Q8WWG9 221 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 NTAN1Q96AB6 310 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 GDAP1L1Q96MZ0 367 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 KLHL32Q96NJ5 620 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 BOCQ9BWV1 1114 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 SLC13A1Q9BZW2 595 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 ASCL3Q9NQ33 180 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 DKK3Q9UBP4 350 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 MFHAS1Q9Y4C4 1052 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 ACTL7AQ9Y615 435 aa21.83■■□□□ 1.09
CPNE1-220ENST00000458038 SPINT1O43278 529 aa21.82■■□□□ 1.08
CPNE1-220ENST00000458038 C1QL1O75973 258 aa21.82■■□□□ 1.08
CPNE1-220ENST00000458038 TM7SF2O76062 418 aa21.82■■□□□ 1.08
CPNE1-220ENST00000458038 GFPT2O94808 682 aa21.82■■□□□ 1.08
CPNE1-220ENST00000458038 TGM2P21980 687 aa21.82■■□□□ 1.08
CPNE1-220ENST00000458038 RBMS1P29558 406 aaKnown RBP21.82■■□□□ 1.08
CPNE1-220ENST00000458038 MLLT3P42568 568 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-220ENST00000458038 GSCP56915 257 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-220ENST00000458038 YBEYP58557 167 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-220ENST00000458038 FMO1Q01740 532 aa21.82■■□□□ 1.08
CPNE1-220ENST00000458038 DEFB133Q30KQ1 61 aa21.82■■□□□ 1.08
CPNE1-220ENST00000458038 GUSBP11Q6P575 273 aa21.82■■□□□ 1.08
CPNE1-220ENST00000458038 RBM44Q6ZP01 1051 aaKnown RBP21.82■■□□□ 1.08
CPNE1-220ENST00000458038 OR6K2Q8NGY2 324 aa21.82■■□□□ 1.08
CPNE1-220ENST00000458038 CXorf40AQ8TE69 158 aa21.82■■□□□ 1.08
CPNE1-220ENST00000458038 TTYH3Q9C0H2 523 aa21.82■■□□□ 1.08
CPNE1-220ENST00000458038 SAMSN1Q9NSI8 373 aaKnown RBP21.82■■□□□ 1.08
CPNE1-220ENST00000458038 APOBEC3BQ9UH17 382 aaKnown RBP21.82■■□□□ 1.08
CPNE1-220ENST00000458038 PCDHGA8Q9Y5G5 932 aa21.82■■□□□ 1.08
CPNE1-220ENST00000458038 FAM72CH0Y354 149 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 BUB1O43683 1085 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 ANXA6P08133 673 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 KRT3P12035 628 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 GKP32189 559 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 SOX5P35711 763 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 BLKP51451 505 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 KIF26BQ2KJY2 2108 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 PRRT3Q5FWE3 981 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 FAM72AQ5TYM5 149 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 FAM72DQ6L9T8 149 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 MACC1Q6ZN28 852 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 FAM72BQ86X60 149 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 PHACTR4Q8IZ21 702 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms