RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 GGT7Q9UJ14 662 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 SALL4Q9UJQ4 1053 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 ITM2BQ9Y287 266 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 DNAH14Q0VDD8 3507 aa15.04■□□□□ -0
HDAC4-204ENST00000446876 A0A1W2PQU0 124 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 TTC24A2A3L6 582 aaPredicted RBP15.03■□□□□ -0
HDAC4-204ENST00000446876 LATO43561 262 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 SPOPO43791 374 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 KRT1P04264 644 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 WNT1P04628 370 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 SYPP08247 313 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 PRLRP16471 622 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 KCNA4P22459 653 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 KDELR1P24390 212 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 SERPINB6P35237 376 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 ATXN3P54252 364 aaPredicted RBP15.03■□□□□ -0
HDAC4-204ENST00000446876 SLC10A7Q0GE19 358 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 SEL1L3Q68CR1 1132 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 FBXL19Q6PCT2 694 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 GDPD4Q6W3E5 623 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 TRIM69Q86WT6 500 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 FAF2Q96CS3 445 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 SERAC1Q96JX3 654 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 KDM4CQ9H3R0 1056 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 IL21RQ9HBE5 538 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 PREBQ9HCU5 417 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 AASDHPPTQ9NRN7 309 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 IMPACTQ9P2X3 320 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 ZFR2Q9UPR6 939 aaKnown RBP15.03■□□□□ -0
HDAC4-204ENST00000446876 CA5BQ9Y2D0 317 aa15.03■□□□□ -0
HDAC4-204ENST00000446876 LRRK1Q38SD2 2015 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 C3orf70A6NLC5 250 aaPredicted RBP15.02■□□□□ -0
HDAC4-204ENST00000446876 SPINT1O43278 529 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 MAFKO60675 156 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 PCDH8O95206 1070 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 PEX11BO96011 259 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 ITIH2P19823 946 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 SDHBP21912 280 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 AFF3P51826 1226 aaKnown RBP15.02■□□□□ -0
HDAC4-204ENST00000446876 HADHBP55084 474 aaKnown RBP15.02■□□□□ -0
HDAC4-204ENST00000446876 GBE1Q04446 702 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 RAD51Q06609 339 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 LBRQ14739 615 aaKnown RBP15.02■□□□□ -0
HDAC4-204ENST00000446876 PAFAH1B3Q15102 231 aaKnown RBP15.02■□□□□ -0
HDAC4-204ENST00000446876 KIF19Q2TAC6 998 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 TMCO4Q5TGY1 634 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 DGLUCYQ7Z3D6 616 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 ADAT2Q7Z6V5 191 aaKnown RBP15.02■□□□□ -0
HDAC4-204ENST00000446876 PRPF39Q86UA1 669 aaKnown RBP15.02■□□□□ -0
HDAC4-204ENST00000446876 MAP7D3Q8IWC1 876 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 RNF25Q96BH1 459 aaPredicted RBP15.02■□□□□ -0
HDAC4-204ENST00000446876 LRIG1Q96JA1 1093 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 NSMCE3Q96MG7 304 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 DESI2Q9BSY9 194 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 OSBPL1AQ9BXW6 950 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 FZD3Q9NPG1 666 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 FADS3Q9Y5Q0 445 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 SNX11Q9Y5W9 270 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 ALG6Q9Y672 507 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 DUSP10Q9Y6W6 482 aa15.02■□□□□ -0
HDAC4-204ENST00000446876 KNL1Q8NG31 2342 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 A0A0U1RQJ8 604 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 KCNK3O14649 394 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 TM4SF5O14894 197 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 SLC31A1O15431 190 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 IPO7O95373 1038 aaKnown RBP15.01□□□□□ -0.01
HDAC4-204ENST00000446876 SLC1A1P43005 524 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 GRIA4P48058 902 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 MARCKSL1P49006 195 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 RACK1P63244 317 aaKnown RBP15.01□□□□□ -0.01
HDAC4-204ENST00000446876 CCDC15Q0P6D6 951 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 GALNT2Q10471 571 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 SLC10A2Q12908 348 aaPredicted RBP15.01□□□□□ -0.01
HDAC4-204ENST00000446876 ZNF235Q14590 738 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 TEAD4Q15561 434 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 ZNF284Q2VY69 593 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 SRLQ86TD4 932 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 HORMAD1Q86X24 394 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 ZSWIM9Q86XI8 627 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 CAMK1DQ8IU85 385 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 RHOT1Q8IXI2 618 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 PGBD5Q8N414 524 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 RNF157Q96PX1 679 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 LACRTQ9GZZ8 138 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 LUC7LQ9NQ29 371 aaKnown RBP15.01□□□□□ -0.01
HDAC4-204ENST00000446876 SEPT3Q9UH03 358 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 ANKRD6Q9Y2G4 727 aa15.01□□□□□ -0.01
HDAC4-204ENST00000446876 FNDC3AQ9Y2H6 1198 aaKnown RBP15.01□□□□□ -0.01
HDAC4-204ENST00000446876 A0A0A6YYK5 440 aaPredicted RBP15□□□□□ -0.01
HDAC4-204ENST00000446876 A0A1W2PR77 199 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 OPHN1O60890 802 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 PRKCGP05129 697 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 TIMP2P16035 220 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 CD38P28907 300 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 GARSP41250 739 aaKnown RBP15□□□□□ -0.01
HDAC4-204ENST00000446876 SCNN1BP51168 640 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 MAXP61244 160 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 FGL2Q14314 439 aa15□□□□□ -0.01
HDAC4-204ENST00000446876 RFTN1Q14699 578 aaPredicted RBP15□□□□□ -0.01
HDAC4-204ENST00000446876 LLGL1Q15334 1064 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms