RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 CD38P28907 300 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 HNRNPDQ14103 355 aaKnown RBP12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 PAFAH1B3Q15102 231 aaKnown RBP12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 CYTH1Q15438 398 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 RALGPS1Q5JS13 557 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 NAPEPLDQ6IQ20 393 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 KIAA1161Q6NSJ0 714 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 GDPD4Q6W3E5 623 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 HORMAD1Q86X24 394 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 BBS5Q8N3I7 341 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 MINDY1Q8N5J2 469 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 MFSD2AQ8NA29 543 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 FAF2Q96CS3 445 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 FEM1CQ96JP0 617 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 ZNF641Q96N77 438 aaPredicted RBP12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 PSKH2Q96QS6 385 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 GTPBP2Q9BX10 602 aaKnown RBP12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 CALN1Q9BXU9 219 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 HAUS2Q9NVX0 235 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 SEPT3Q9UH03 358 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 PCDHGB2Q9Y5G2 931 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 LAMA1P25391 3075 aa12.72□□□□□ -0.37
CDCA4P3-201ENST00000442572 A0A1W2PQ67 120 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 GOLGA6L6A8MZA4 724 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 PLK4O00444 970 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 YKT6O15498 198 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 NDUFA10O95299 355 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 UGT2B4P06133 528 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 CEACAM1P13688 526 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 CSNK1EP49674 416 aaKnown RBP12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 TAS2R40P59535 323 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 RPS21P63220 83 aaKnown RBP12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 LBRQ14739 615 aaKnown RBP12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 POM121L1PQ3SYA9 428 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 ANKRD20A8PQ5CZ79 823 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 ATXN7L2Q5T6C5 722 aaPredicted RBP12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 BRAT1Q6PJG6 821 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 LEKR1Q6ZMV7 388 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 PARS2Q7L3T8 475 aaKnown RBP12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 ADAT2Q7Z6V5 191 aaKnown RBP12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 TXLNBQ8N3L3 684 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 ATPAF2Q8N5M1 289 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 NSMCE1Q8WV22 266 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 ASB12Q8WXK4 309 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 FATE1Q969F0 183 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 VOPP1Q96AW1 172 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 SERAC1Q96JX3 654 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 CINPQ9BW66 212 aaPredicted RBP12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 SLC32A1Q9H598 525 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 EBF2Q9HAK2 575 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 ETNK2Q9NVF9 386 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 DDX56Q9NY93 547 aaKnown RBP12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 AMACRQ9UHK6 382 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 ANKRD6Q9Y2G4 727 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 PCDHA13Q9Y5I0 950 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 FADS3Q9Y5Q0 445 aa12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 EPN1Q9Y6I3 576 aaPredicted RBP12.71□□□□□ -0.37
CDCA4P3-201ENST00000442572 DCHS1Q96JQ0 3298 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 COL5A1P20908 1838 aaPredicted RBP12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 TSPAN11A1L157 253 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 DCDC2BA2VCK2 349 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 MAFKO60675 156 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 PCDH8O95206 1070 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 KDELR1P24390 212 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 SERPINA4P29622 427 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 CTSKP43235 329 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 C21orf59P57076 290 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 AP1S1P61966 158 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 PPP2CBP62714 309 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 PPP2CAP67775 309 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 ZNF423Q2M1K9 1284 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 ZNF284Q2VY69 593 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 TMEM259Q4ZIN3 620 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 ZFYVE27Q5T4F4 411 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 TIGD7Q6NT04 549 aaPredicted RBP12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 RHOT1Q8IXI2 618 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 OXR1Q8N573 874 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 PCDH19Q8TAB3 1148 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 SPOCK2Q92563 424 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 KLHL32Q96NJ5 620 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 TSGA13Q96PP4 275 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 SUV39H2Q9H5I1 410 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 ATP13A3Q9H7F0 1226 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 ERVMER34-1Q9H9K5 563 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 AASDHPPTQ9NRN7 309 aa12.7□□□□□ -0.38
CDCA4P3-201ENST00000442572 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.69□□□□□ -0.38
CDCA4P3-201ENST00000442572 A0A1B0GVT2 93 aa12.69□□□□□ -0.38
CDCA4P3-201ENST00000442572 A0A1W2PQU0 124 aa12.69□□□□□ -0.38
CDCA4P3-201ENST00000442572 A0A1W2PR77 199 aa12.69□□□□□ -0.38
CDCA4P3-201ENST00000442572 TMEM110-MUSTN1A8MSY1 372 aa12.69□□□□□ -0.38
CDCA4P3-201ENST00000442572 BTNL10A8MVZ5 291 aa12.69□□□□□ -0.38
CDCA4P3-201ENST00000442572 RNF103O00237 685 aa12.69□□□□□ -0.38
CDCA4P3-201ENST00000442572 AREL1O15033 823 aa12.69□□□□□ -0.38
CDCA4P3-201ENST00000442572 PSTPIP1O43586 416 aa12.69□□□□□ -0.38
CDCA4P3-201ENST00000442572 KCNK5O95279 499 aa12.69□□□□□ -0.38
CDCA4P3-201ENST00000442572 CD48P09326 243 aa12.69□□□□□ -0.38
CDCA4P3-201ENST00000442572 ZFXP17010 805 aaPredicted RBP12.69□□□□□ -0.38
CDCA4P3-201ENST00000442572 MX2P20592 715 aa12.69□□□□□ -0.38
CDCA4P3-201ENST00000442572 HNRNPA2B1P22626 353 aaKnown RBP12.69□□□□□ -0.38
CDCA4P3-201ENST00000442572 AKT2P31751 481 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms