RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 ARFGAP1Q8N6T3 406 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 SPOCK2Q92563 424 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 VOPP1Q96AW1 172 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 C1QTNF7Q9BXJ2 289 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 MAGEB5Q9BZ81 275 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 TSPY26PQ9H489 355 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 ZDHHC6Q9H6R6 413 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 USP29Q9HBJ7 922 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 LUC7L2Q9Y383 392 aaKnown RBP11.31□□□□□ -0.6
NELFE-205ENST00000441998 IGF2RP11717 2491 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 FAM170AA1A519 330 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 TSPAN11A1L157 253 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 TMCO5BA8MYB1 307 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 EEF2KO00418 725 aaKnown RBP11.3□□□□□ -0.6
NELFE-205ENST00000441998 KRIT1O00522 736 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 ENC1O14682 589 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 FPGTO14772 594 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 PRAMEF11O60813 436 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 PAK4O96013 591 aaPredicted RBP11.3□□□□□ -0.6
NELFE-205ENST00000441998 MIPP30301 263 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 HNRNPH3P31942 346 aaKnown RBP11.3□□□□□ -0.6
NELFE-205ENST00000441998 RHOAP61586 193 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 HNRNPKP61978 463 aaKnown RBP eCLIP11.3□□□□□ -0.6
NELFE-205ENST00000441998 YPEL5P62699 121 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 E2F1Q01094 437 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 ELP6Q0PNE2 266 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 DPYSL2Q16555 572 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 HS1BP3Q53T59 392 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 PRAMEF14Q5SWL7 426 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 E4F1Q66K89 784 aaPredicted RBP11.3□□□□□ -0.6
NELFE-205ENST00000441998 HGSNATQ68CP4 663 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 BRAT1Q6PJG6 821 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 RFX8Q6ZV50 586 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 TTC7BQ86TV6 843 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 ZNF354CQ86Y25 554 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 LRRC49Q8IUZ0 686 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 RYBPQ8N488 228 aaPredicted RBP11.3□□□□□ -0.6
NELFE-205ENST00000441998 NIPA2Q8N8Q9 360 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 PNPLA1Q8N8W4 532 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 HMCESQ96FZ2 354 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 CNDP2Q96KP4 475 aaKnown RBP11.3□□□□□ -0.6
NELFE-205ENST00000441998 TBATAQ96M53 351 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 ZNF599Q96NL3 588 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 DUSP23Q9BVJ7 150 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 TM6SF2Q9BZW4 377 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 DHX35Q9H5Z1 703 aaKnown RBP11.3□□□□□ -0.6
NELFE-205ENST00000441998 ZWILCHQ9H900 591 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 PDFQ9HBH1 243 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 EVA1BQ9NVM1 165 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 NCKIPSDQ9NZQ3 722 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 UBA2Q9UBT2 640 aaPredicted RBP11.3□□□□□ -0.6
NELFE-205ENST00000441998 ZMIZ1Q9ULJ6 1067 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.3□□□□□ -0.65e-8■■■■□ 26
NELFE-205ENST00000441998 CSNK1G3Q9Y6M4 447 aa11.3□□□□□ -0.6
NELFE-205ENST00000441998 SPTY2D1-AS1A0A0U1RR47 76 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 A0A1W2PQ67 120 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 TMEM110-MUSTN1A8MSY1 372 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 RNF103O00237 685 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 NEMP1O14524 444 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 DAPK3O43293 454 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 LRCH4O75427 683 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 RFPL3O75679 317 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 CSF2P04141 144 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 UGT2B4P06133 528 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 ALPPL2P10696 532 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 PRLRP16471 622 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 DGKAP23743 735 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 ACP1P24666 158 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 HSPA9P38646 679 aaKnown RBP11.29□□□□□ -0.6
NELFE-205ENST00000441998 RENBPP51606 427 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 PFN3P60673 137 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 POLR2LP62875 67 aaKnown RBP11.29□□□□□ -0.6
NELFE-205ENST00000441998 IL10RBQ08334 325 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 BNIP3Q12983 259 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 PTK2BQ14289 1009 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 AGERQ15109 404 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 CYTH1Q15438 398 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 TMEM52BQ4KMG9 183 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 SEL1L3Q68CR1 1132 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 GCNT7Q6ZNI0 430 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 Q6ZSR6 202 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 GATAD2AQ86YP4 633 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 SLC25A45Q8N413 288 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 EID2Q8N6I1 236 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 PDCD7Q8N8D1 485 aaKnown RBP11.29□□□□□ -0.6
NELFE-205ENST00000441998 FAM181AQ8N9Y4 354 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 OR13H1Q8NG92 308 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 TEKT4Q8WW24 435 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 ZCCHC14Q8WYQ9 949 aaKnown RBP11.29□□□□□ -0.6
NELFE-205ENST00000441998 RFFLQ8WZ73 363 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 CENPTQ96BT3 561 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 ZNF653Q96CK0 615 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 BMFQ96LC9 184 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 KLHL32Q96NJ5 620 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 KLF6Q99612 283 aaPredicted RBP11.29□□□□□ -0.6
NELFE-205ENST00000441998 SNRNP25Q9BV90 132 aaKnown RBP11.29□□□□□ -0.6
NELFE-205ENST00000441998 KLC2Q9H0B6 622 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 SUV39H2Q9H5I1 410 aa11.29□□□□□ -0.6
NELFE-205ENST00000441998 RCOR3Q9P2K3 495 aaPredicted RBP11.29□□□□□ -0.6
NELFE-205ENST00000441998 IGLON5A6NGN9 336 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms