RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 SNAP91O60641 907 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 PRAMEF11O60813 436 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 METTL18O95568 372 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 CD160O95971 181 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 JCHAINP01591 159 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 UQCRHP07919 91 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 CISD3P0C7P0 127 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 CCNB1P14635 433 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 TYRP14679 529 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 PSMC3P17980 439 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 SP100P23497 879 aaPredicted RBP7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 ECHS1P30084 290 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 HLA-FP30511 346 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 CD68P34810 354 aaPredicted RBP7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 ADCY8P40145 1251 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 GRIA4P48058 902 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 CARSP49589 748 aaKnown RBP7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 PLK1P53350 603 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 VSNL1P62760 191 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 IFI35P80217 286 aaPredicted RBP7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 ARF5P84085 180 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 GAD2Q05329 585 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 IL10RBQ08334 325 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 SLC10A7Q0GE19 358 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 LMAN2Q12907 356 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 GPS1Q13098 491 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 ZBTB17Q13105 803 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 PDGFRLQ15198 375 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 P3H1Q32P28 736 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 LEXMQ3ZCV2 418 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 TEX44Q53QW1 395 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 ANKRD20A2Q5SQ80 823 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 ANKRD20A1Q5TYW2 823 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 ANKRD20A3Q5VUR7 823 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 IL31Q6EBC2 164 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 TIGD7Q6NT04 549 aaPredicted RBP7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 WDR93Q6P2C0 686 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 ZDHHC24Q6UX98 284 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 CCNI2Q6ZMN8 369 aaPredicted RBP7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 KIAA0907Q7Z7F0 614 aaPredicted RBP7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 IFT20Q8IY31 132 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 APCDD1Q8J025 514 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 ZNF567Q8N184 647 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 TAB3Q8N5C8 712 aaPredicted RBP7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 TEX26Q8N6G2 289 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 NAT16Q8N8M0 369 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 CCDC89Q8N998 374 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 CCHCR1Q8TD31 782 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 NXPE3Q969Y0 559 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 TEKT5Q96M29 485 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 SPATA13Q96N96 652 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 SLC30A3Q99726 388 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 GORASP1Q9BQQ3 440 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 SLC2A11Q9BYW1 496 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 RAB17Q9H0T7 212 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 MUC3BQ9H195 1237 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 NEUROG2Q9H2A3 272 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 ECT2Q9H8V3 914 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 ATP13A1Q9HD20 1204 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 ZDHHC18Q9NUE0 388 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 ABCB8Q9NUT2 735 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 SEPT10Q9P0V9 454 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 ASIC3Q9UHC3 531 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 INTS6Q9UL03 887 aaKnown RBP7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 ACTL7AQ9Y615 435 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 NUMBLQ9Y6R0 609 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 NOTCH4Q99466 2003 aa7.16□□□□□ -1.26
LSM3P3-201ENST00000436601 A0A096LPE4 126 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 A0A1W2PPZ6 126 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 CBX4O00257 560 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 DNALI1O14645 258 aaPredicted RBP7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 CHADO15335 359 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 OPHN1O60890 802 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 FBXO24O75426 580 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 ZNF189O75820 626 aaPredicted RBP7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 SEC31AO94979 1220 aaKnown RBP7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 NFATC1O95644 943 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 CELA3AP09093 270 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 MYBL2P10244 700 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 ADH5P11766 374 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 ACPPP15309 386 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 ITIH2P19823 946 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 TNFRSF8P28908 595 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 GDI1P31150 447 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 ETFBP38117 255 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 SLC6A11P48066 632 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 RENBPP51606 427 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 OXCT1P55809 520 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 SLC12A1Q13621 1099 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 RUNX3Q13761 415 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 HNRNPDQ14103 355 aaKnown RBP7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 CYTH1Q15438 398 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 SMAD2Q15796 467 aaKnown RBP7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 DBN1Q16643 649 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 PARP6Q2NL67 630 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 PLEKHG6Q3KR16 790 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 FUT11Q495W5 492 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 PITRM1Q5JRX3 1037 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 RNASEH2BQ5TBB1 312 aaKnown RBP7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 FAXCQ5TGI0 409 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms