RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 CSNK1DP48730 415 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 TAS2R40P59535 323 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 BNC1Q01954 994 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 DPYSL3Q14195 570 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 ATP13A4Q4VNC1 1196 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 PPM1JQ5JR12 505 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 ZFYVE27Q5T4F4 411 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 ZSCAN30Q86W11 494 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 HORMAD1Q86X24 394 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 TMTC1Q8IUR5 882 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 NETO2Q8NC67 525 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 SLC6A18Q96N87 628 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 KLHL32Q96NJ5 620 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 CINPQ9BW66 212 aaPredicted RBP16.48■□□□□ 0.23
SMPD4-207ENST00000435455 GAREM1Q9H706 876 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 DKK3Q9UBP4 350 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 NCOR2Q9Y618 2525 aa16.48■□□□□ 0.23
SMPD4-207ENST00000435455 A0A1W2PQU0 124 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 PCNX2A6NKB5 2137 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 GJB3O75712 270 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 ZNF883P0CG24 379 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 CSRP1P21291 193 aaKnown RBP16.47■□□□□ 0.23
SMPD4-207ENST00000435455 IL4RP24394 825 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 CDC25BP30305 580 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 SLC1A1P43005 524 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 RENBPP51606 427 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 HADHBP55084 474 aaKnown RBP16.47■□□□□ 0.23
SMPD4-207ENST00000435455 C21orf59P57076 290 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 MMRN1Q13201 1228 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 HLA-BQ31612 363 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 KIAA1161Q6NSJ0 714 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 ARHGAP36Q6ZRI8 547 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 ATPAF2Q8N5M1 289 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 OR2I1PQ8NGU4 316 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 FEM1CQ96JP0 617 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 EXOC2Q96KP1 924 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 SEPT3Q9UH03 358 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 FADS3Q9Y5Q0 445 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 TMEM131Q92545 1883 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 ANKRD36A6QL64 1941 aa16.47■□□□□ 0.23
SMPD4-207ENST00000435455 A0A1W2PR77 199 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 ZNF487B1APH4 448 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 PRAMEF26H0Y7S4 382 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 NEMP1O14524 444 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 TSPAN6O43657 245 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 DFNA5O60443 496 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 IPO7O95373 1038 aaKnown RBP16.46■□□□□ 0.23
SMPD4-207ENST00000435455 CD48P09326 243 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 CTSKP43235 329 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 SUOXP51687 545 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 RPS21P63220 83 aaKnown RBP16.46■□□□□ 0.23
SMPD4-207ENST00000435455 NSUN2Q08J23 767 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMPD4-207ENST00000435455 OVGP1Q12889 678 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 LBRQ14739 615 aaKnown RBP16.46■□□□□ 0.23
SMPD4-207ENST00000435455 PAFAH1B3Q15102 231 aaKnown RBP16.46■□□□□ 0.23
SMPD4-207ENST00000435455 KIF19Q2TAC6 998 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 ZNF284Q2VY69 593 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 TMEM259Q4ZIN3 620 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 ANKRD20A8PQ5CZ79 823 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 LRRC38Q5VT99 294 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 SRLQ86TD4 932 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 IQCHQ86VS3 1027 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 TP53INP2Q8IXH6 220 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 BBS5Q8N3I7 341 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 TSEN2Q8NCE0 465 aaKnown RBP16.46■□□□□ 0.23
SMPD4-207ENST00000435455 PCDH19Q8TAB3 1148 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 HCAR2Q8TDS4 363 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 NSMCE1Q8WV22 266 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 VOPP1Q96AW1 172 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 FAF2Q96CS3 445 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 ZNF641Q96N77 438 aaPredicted RBP16.46■□□□□ 0.23
SMPD4-207ENST00000435455 TUBGCP5Q96RT8 1024 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 SLC32A1Q9H598 525 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 ATP13A3Q9H7F0 1226 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 IMPACTQ9P2X3 320 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 ZFR2Q9UPR6 939 aaKnown RBP16.46■□□□□ 0.23
SMPD4-207ENST00000435455 PCDHA13Q9Y5I0 950 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 SNX11Q9Y5W9 270 aa16.46■□□□□ 0.23
SMPD4-207ENST00000435455 A0A0A6YYK5 440 aaPredicted RBP16.45■□□□□ 0.22
SMPD4-207ENST00000435455 INSIG1O15503 277 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 MAFKO60675 156 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 MAGEC1O60732 1142 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 KCNK5O95279 499 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 NDUFA10O95299 355 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 CEACAM1P13688 526 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 KCNA4P22459 653 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 KDELR1P24390 212 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 AKT2P31751 481 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 HSPA9P38646 679 aaKnown RBP16.45■□□□□ 0.22
SMPD4-207ENST00000435455 NOP2P46087 812 aaKnown RBP16.45■□□□□ 0.22
SMPD4-207ENST00000435455 ZNF235Q14590 738 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 STAT4Q14765 748 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 ODF2Q5BJF6 829 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 LAYNQ6UX15 382 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 PIP4P1Q86T03 277 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 TTC7BQ86TV6 843 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 VSIG1Q86XK7 387 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 MFSD2AQ8NA29 543 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 PSKH2Q96QS6 385 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 SUV39H2Q9H5I1 410 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms