RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ZNF598Q86UK7 904 aaKnown RBP10.54□□□□□ -0.72
CD44-210ENST00000434472 SCN4BQ8IWT1 228 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 CENPLQ8N0S6 344 aaPredicted RBP10.54□□□□□ -0.72
CD44-210ENST00000434472 NUP93Q8N1F7 819 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 KYQ8NBH2 561 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 MAPK15Q8TD08 544 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 SLC26A7Q8TE54 656 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 MRGPRX2Q96LB1 330 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 GPR78Q96P69 363 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 LENG8Q96PV6 779 aaPredicted RBP10.54□□□□□ -0.72
CD44-210ENST00000434472 ZCWPW1Q9H0M4 648 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 EML4Q9HC35 981 aaKnown RBP10.54□□□□□ -0.72
CD44-210ENST00000434472 SPATS2LQ9NUQ6 558 aaKnown RBP10.54□□□□□ -0.72
CD44-210ENST00000434472 OSER1Q9NX31 292 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 CLIC5Q9NZA1 410 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 NCKIPSDQ9NZQ3 722 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 PDP2Q9P2J9 529 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 XPR1Q9UBH6 696 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 POMPQ9Y244 141 aa10.54□□□□□ -0.72
CD44-210ENST00000434472 CCDC78A2IDD5 438 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 PEX1O43933 1283 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 DLX3O60479 287 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 EOMESO95936 686 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 MOCS2O96007 188 aaPredicted RBP10.53□□□□□ -0.72
CD44-210ENST00000434472 CHRNGP07510 517 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 CPB1P15086 417 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 HOXB8P17481 243 aaPredicted RBP10.53□□□□□ -0.72
CD44-210ENST00000434472 CDC25CP30307 473 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 SLC26A3P40879 764 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 MAGEA11P43364 429 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 SERPINH1P50454 418 aaKnown RBP10.53□□□□□ -0.72
CD44-210ENST00000434472 TBX4P57082 545 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 TAS2R39P59534 338 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 MPP1Q00013 466 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 TNK2Q07912 1038 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 MTA1Q13330 715 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 CTBP1Q13363 440 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 MSLNQ13421 630 aaPredicted RBP10.53□□□□□ -0.72
CD44-210ENST00000434472 PSMD5Q16401 504 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 SLC39A12Q504Y0 691 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 TSTD2Q5T7W7 516 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 ZNF470Q6ECI4 717 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 GLB1LQ6UWU2 654 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 DENND6AQ8IWF6 608 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 SLC25A41Q8N5S1 370 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 HASPINQ8TF76 798 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 NXNL1Q96CM4 212 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 IMP4Q96G21 291 aaKnown RBP10.53□□□□□ -0.72
CD44-210ENST00000434472 SLC39A13Q96H72 371 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 ZYG11BQ9C0D3 744 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 KLHL4Q9C0H6 718 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 ZNF385DQ9H6B1 395 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 NMUR1Q9HB89 426 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 CYP4F11Q9HBI6 524 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 ATP13A1Q9HD20 1204 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 MRPL40Q9NQ50 206 aaKnown RBP10.53□□□□□ -0.72
CD44-210ENST00000434472 MAN1C1Q9NR34 630 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 OLA1Q9NTK5 396 aaKnown RBP10.53□□□□□ -0.72
CD44-210ENST00000434472 TMEM248Q9NWD8 314 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 STK39Q9UEW8 545 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 PPM1HQ9ULR3 514 aa10.53□□□□□ -0.72
CD44-210ENST00000434472 DOCK3Q8IZD9 2030 aa10.52□□□□□ -0.72
CD44-210ENST00000434472 DPPA5A6NC42 116 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 SLC7A4O43246 635 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 MSI1O43347 362 aaKnown RBP10.52□□□□□ -0.73
CD44-210ENST00000434472 BUD23O43709 281 aaKnown RBP10.52□□□□□ -0.73
CD44-210ENST00000434472 ADAMTS4O75173 837 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 TADA2AO75478 443 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 PDE5AO76074 875 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 OAZ2O95190 189 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 F7P08709 466 aaPredicted RBP10.52□□□□□ -0.73
CD44-210ENST00000434472 LTA4HP09960 611 aaKnown RBP10.52□□□□□ -0.73
CD44-210ENST00000434472 LINGO3P0C6S8 592 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 SP100P23497 879 aaPredicted RBP10.52□□□□□ -0.73
CD44-210ENST00000434472 YY1P25490 414 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 ARNTP27540 789 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 CST5P28325 142 aaPredicted RBP10.52□□□□□ -0.73
CD44-210ENST00000434472 GLRBP48167 497 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 LEPRP48357 1165 aaKnown RBP10.52□□□□□ -0.73
CD44-210ENST00000434472 PFKPQ01813 784 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 NSUN2Q08J23 767 aaKnown RBP eCLIP10.52□□□□□ -0.73
CD44-210ENST00000434472 SREBF2Q12772 1141 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 RFTN1Q14699 578 aaPredicted RBP10.52□□□□□ -0.73
CD44-210ENST00000434472 MAPRE2Q15555 327 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 SLC14A2Q15849 920 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 ARTNQ5T4W7 220 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 MARC1Q5VT66 337 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 NXNQ6DKJ4 435 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 RGMBQ6NW40 437 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 BNC2Q6ZN30 1099 aaPredicted RBP10.52□□□□□ -0.73
CD44-210ENST00000434472 C14orf80Q86SX3 495 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 SNX32Q86XE0 403 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 SLC22A9Q8IVM8 553 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 CEP97Q8IW35 865 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 KBTBD2Q8IY47 623 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 LSMEM2Q8N112 164 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.52□□□□□ -0.73
CD44-210ENST00000434472 CCNYL1Q8N7R7 359 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 CEP70Q8NHQ1 597 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 GATA6Q92908 595 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms