RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TMEM51Q9NW97 253 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 OCIAD1Q9NX40 245 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 DNAJC16Q9Y2G8 782 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 PAM16Q9Y3D7 125 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 MORC2Q9Y6X9 1032 aaPredicted RBP3.52□□□□□ -1.85
CLK1-204ENST00000432425 SMTNL1A8MU46 457 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 B9A039 149 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 PEX12O00623 359 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 PPP1R3DO95685 299 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 LDHAP00338 332 aaKnown RBP3.52□□□□□ -1.85
CLK1-204ENST00000432425 DHRS4L1P0CG22 281 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 MYF6P23409 242 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 CENPAP49450 140 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 MXI1P50539 228 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 TUBA1BP68363 451 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 ADORA2A-AS1P86434 159 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 SLC18A2Q05940 514 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 FAM27E3Q08E93 113 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 ST3GAL1Q11201 340 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 COASYQ13057 564 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 TRAF3Q13114 568 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 LPIN1Q14693 890 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 KIF19Q2TAC6 998 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 FBXO43Q4G163 708 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 PLEKHO1Q53GL0 409 aaPredicted RBP3.52□□□□□ -1.85
CLK1-204ENST00000432425 KLHL24Q6TFL4 600 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 IL20RBQ6UXL0 311 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 Q6ZTC4 211 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 NEK10Q6ZWH5 1172 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 ARMC9Q7Z3E5 817 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 CHD1LQ86WJ1 897 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 DENND6AQ8IWF6 608 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 SPATA5Q8NB90 893 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 GPT2Q8TD30 523 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 TRIM63Q969Q1 353 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 COG8Q96MW5 612 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 DUX5Q96PT3 197 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 C1QTNF4Q9BXJ3 329 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 CLK4Q9HAZ1 481 aaKnown RBP3.52□□□□□ -1.85
CLK1-204ENST00000432425 SPATS2LQ9NUQ6 558 aaKnown RBP3.52□□□□□ -1.85
CLK1-204ENST00000432425 ICAM5Q9UMF0 924 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 SLC45A1Q9Y2W3 748 aa3.52□□□□□ -1.85
CLK1-204ENST00000432425 IGLV5-52A0A0A0MRZ9 124 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 DYTNA2CJ06 578 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 SLC16A5O15375 505 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 TCEA3O75764 348 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 TFPIP10646 304 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 DAOP14920 347 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 PEX5P50542 639 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 CYP4A11Q02928 519 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 SLC18A3Q16572 532 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 EDRF1Q3B7T1 1238 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 NAPEPLDQ6IQ20 393 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.51□□□□□ -1.85
CLK1-204ENST00000432425 MON1AQ86VX9 555 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 MB21D2Q8IYB1 491 aaPredicted RBP3.51□□□□□ -1.85
CLK1-204ENST00000432425 NEXN-AS1Q8NBZ9 246 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 GDPD5Q8WTR4 605 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 UBE2Q2Q8WVN8 375 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 OTULINQ96BN8 352 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 STN1Q9H668 368 aaKnown RBP3.51□□□□□ -1.85
CLK1-204ENST00000432425 TXLNGQ9NUQ3 528 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 ALKBH4Q9NXW9 302 aa3.51□□□□□ -1.85
CLK1-204ENST00000432425 LOC102724159A0A0B4J2E5 919 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 A0A1B0GUV1 79 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 TYW5A2RUC4 315 aaKnown RBP3.5□□□□□ -1.85
CLK1-204ENST00000432425 NBNO60934 754 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 LDB3O75112 727 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 CH25HO95992 272 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 CHRM4P08173 479 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 CNPP09543 421 aaKnown RBP3.5□□□□□ -1.85
CLK1-204ENST00000432425 LIFRP42702 1097 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 ARL4CP56559 192 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 ERVFC1-1P60608 527 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 BNC1Q01954 994 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 HYAL1Q12794 435 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 PWP2Q15269 919 aaKnown RBP3.5□□□□□ -1.85
CLK1-204ENST00000432425 PRSS45Q7RTY3 260 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 CCDC105Q8IYK2 499 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 USP38Q8NB14 1042 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 TMEM170AQ8WVE7 144 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 TRIB2Q92519 343 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 CNOT9Q92600 299 aaKnown RBP3.5□□□□□ -1.85
CLK1-204ENST00000432425 IGSF21Q96ID5 467 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 ADGRG7Q96K78 797 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 YME1L1Q96TA2 773 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 CD180Q99467 661 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 RETREG1Q9H6L5 497 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 ANKRD10Q9NXR5 420 aa3.5□□□□□ -1.85
CLK1-204ENST00000432425 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.49□□□□□ -1.85
CLK1-204ENST00000432425 VWA3AA6NCI4 1184 aa3.49□□□□□ -1.85
CLK1-204ENST00000432425 KLK10O43240 276 aa3.49□□□□□ -1.85
CLK1-204ENST00000432425 TSPAN3O60637 253 aa3.49□□□□□ -1.85
CLK1-204ENST00000432425 MT3P25713 68 aa3.49□□□□□ -1.85
CLK1-204ENST00000432425 HDAC4P56524 1084 aa3.49□□□□□ -1.85
CLK1-204ENST00000432425 KRTAP10-7P60409 375 aaPredicted RBP3.49□□□□□ -1.85
CLK1-204ENST00000432425 POU3F1Q03052 451 aaPredicted RBP3.49□□□□□ -1.85
CLK1-204ENST00000432425 EEF1A2Q05639 463 aaKnown RBP3.49□□□□□ -1.85
CLK1-204ENST00000432425 GRAMD1BQ3KR37 738 aa3.49□□□□□ -1.85
CLK1-204ENST00000432425 CES5AQ6NT32 575 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms