RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 ACSL4O60488 711 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 ADRB2P07550 413 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 ACAT1P24752 427 aaKnown RBP13.88□□□□□ -0.19
RUNX3-203ENST00000399916 HK2P52789 917 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 ATN1P54259 1190 aaPredicted RBP13.88□□□□□ -0.19
RUNX3-203ENST00000399916 ILF2Q12905 390 aaKnown RBP13.88□□□□□ -0.19
RUNX3-203ENST00000399916 KLHL12Q53G59 568 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 ZNF540Q8NDQ6 660 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 C19orf18Q8NEA5 215 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 TRUB1Q8WWH5 349 aaKnown RBP13.88□□□□□ -0.19
RUNX3-203ENST00000399916 LENG9Q96B70 501 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 SLC38A10Q9HBR0 1119 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 FBXO28Q9NVF7 368 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 OAZ3Q9UMX2 235 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 SCAF8Q9UPN6 1271 aaKnown RBP13.88□□□□□ -0.19
RUNX3-203ENST00000399916 ADGRA2Q96PE1 1338 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 APOL1O14791 398 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 BUD23O43709 281 aaKnown RBP13.88□□□□□ -0.19
RUNX3-203ENST00000399916 F7P08709 466 aaPredicted RBP13.88□□□□□ -0.19
RUNX3-203ENST00000399916 RPL35P42766 123 aaKnown RBP13.88□□□□□ -0.19
RUNX3-203ENST00000399916 VBP1P61758 197 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 FAM71AQ8IYT1 594 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 DENND1AQ8TEH3 1009 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 SPAG4Q9NPE6 437 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 ZNF358Q9NW07 568 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 SFMBT1Q9UHJ3 866 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 PCDHGC3Q9UN70 934 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 PRR23D1E9PI22 279 aaPredicted RBP13.88□□□□□ -0.19
RUNX3-203ENST00000399916 PRR23D2P0DMB1 279 aaPredicted RBP13.88□□□□□ -0.19
RUNX3-203ENST00000399916 PDGFRAP16234 1089 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 UQCRC1P31930 480 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
RUNX3-203ENST00000399916 SYT16Q17RD7 645 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 CLEC16AQ2KHT3 1053 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 GPAT2Q6NUI2 795 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 ZNF544Q6NX49 715 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 SV2AQ7L0J3 742 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 GRAMD2AQ8IUY3 354 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 NIM1KQ8IY84 436 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 CADM3Q8N126 398 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 NSMCE2Q96MF7 247 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 TMEM245Q9H330 911 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 ATP13A3Q9H7F0 1226 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 ASNSD1Q9NWL6 643 aa13.88□□□□□ -0.19
RUNX3-203ENST00000399916 H0YJX3 145 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 HNRNPLP14866 589 aaKnown RBP eCLIP13.87□□□□□ -0.19
RUNX3-203ENST00000399916 RGS7P49802 495 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 SEZ6Q53EL9 994 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 CDHR3Q6ZTQ4 885 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 HIPK1Q86Z02 1210 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 C12orf56Q8IXR9 622 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 NEURL2Q9BR09 285 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 WRAP73Q9P2S5 460 aaPredicted RBP13.87□□□□□ -0.19
RUNX3-203ENST00000399916 CPSF3Q9UKF6 684 aaKnown RBP13.87□□□□□ -0.19
RUNX3-203ENST00000399916 SLC9A8Q9Y2E8 581 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 ISPDA4D126 451 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 HTRA2O43464 458 aaPredicted RBP13.87□□□□□ -0.19
RUNX3-203ENST00000399916 CYP1A2P05177 515 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 S100A9P06702 114 aaKnown RBP13.87□□□□□ -0.19
RUNX3-203ENST00000399916 RPL14P50914 215 aaKnown RBP13.87□□□□□ -0.19
RUNX3-203ENST00000399916 KPNA2P52292 529 aaKnown RBP13.87□□□□□ -0.19
RUNX3-203ENST00000399916 SLC9B1Q4ZJI4 515 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 ANKRD13BQ86YJ7 626 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 UBR7Q8N806 425 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 SLC44A1Q8WWI5 657 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 ATL1Q8WXF7 558 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 AZIN2Q96A70 460 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 MOCOSQ96EN8 888 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 GAD1Q99259 594 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 HERPUD2Q9BSE4 406 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 SAV1Q9H4B6 383 aaPredicted RBP13.87□□□□□ -0.19
RUNX3-203ENST00000399916 RASSF1Q9NS23 344 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 SLC38A7Q9NVC3 462 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 TRPC5OSA6NMA1 111 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 ZW10O43264 779 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 DENRO43583 198 aaKnown RBP13.87□□□□□ -0.19
RUNX3-203ENST00000399916 HUS1O60921 280 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 POLBP06746 335 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 WEE1P30291 646 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 YWHABP31946 246 aaKnown RBP13.87□□□□□ -0.19
RUNX3-203ENST00000399916 CCT8P50990 548 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 GTF2A2P52657 109 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 KCNK10P57789 538 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 PIGHQ14442 188 aaPredicted RBP13.87□□□□□ -0.19
RUNX3-203ENST00000399916 ZNF57Q68EA5 555 aaPredicted RBP13.87□□□□□ -0.19
RUNX3-203ENST00000399916 TTC23LQ6PF05 361 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 CHURC1Q8WUH1 139 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 OR52B2Q96RD2 323 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 PDGFDQ9GZP0 370 aaPredicted RBP13.87□□□□□ -0.19
RUNX3-203ENST00000399916 TRIT1Q9H3H1 467 aaKnown RBP13.87□□□□□ -0.19
RUNX3-203ENST00000399916 NYAP2Q9P242 653 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 ZNF222Q9UK12 451 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 CPQQ9Y646 472 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 CCDC88AQ3V6T2 1871 aa13.87□□□□□ -0.19
RUNX3-203ENST00000399916 BTBD19C9JJ37 291 aa13.86□□□□□ -0.19
RUNX3-203ENST00000399916 PLOD3O60568 738 aa13.86□□□□□ -0.19
RUNX3-203ENST00000399916 MYL4P12829 197 aa13.86□□□□□ -0.19
RUNX3-203ENST00000399916 AKIRIN2Q53H80 203 aa13.86□□□□□ -0.19
RUNX3-203ENST00000399916 LRRC8DQ7L1W4 858 aa13.86□□□□□ -0.19
RUNX3-203ENST00000399916 ITIH5Q86UX2 942 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms