RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 NTAN1Q96AB6 310 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 RMDN2Q96LZ7 410 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 ARHGEF4Q9NR80 690 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 PIGVQ9NUD9 493 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 DTLQ9NZJ0 730 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 CFAP97Q9P2B7 532 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 ZC3H7BQ9UGR2 993 aaKnown RBP14.5□□□□□ -0.09
HMGA1-203ENST00000374116 SCOCQ9UIL1 159 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 M0QYT0 321 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 NARSO43776 548 aaKnown RBP14.5□□□□□ -0.09
HMGA1-203ENST00000374116 HNRNPCL1O60812 293 aaKnown RBP14.5□□□□□ -0.09
HMGA1-203ENST00000374116 EDF1O60869 148 aaKnown RBP14.5□□□□□ -0.09
HMGA1-203ENST00000374116 FAM155BO75949 473 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 MAP3K6O95382 1288 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 AMPD1P23109 780 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 PRKCHP24723 683 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 MAGEA3P43357 314 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 MGAT5Q09328 741 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 SEMA3BQ13214 749 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 FAXCQ5TGI0 409 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 FAM47EQ6ZV65 393 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 SLC26A11Q86WA9 606 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 FAM13CQ8NE31 585 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 TTC8Q8TAM2 541 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 TFB1MQ8WVM0 346 aaKnown RBP14.5□□□□□ -0.09
HMGA1-203ENST00000374116 CFAP36Q96G28 342 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 KLF16Q9BXK1 252 aaPredicted RBP14.5□□□□□ -0.09
HMGA1-203ENST00000374116 VPS11Q9H270 941 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 XAB2Q9HCS7 855 aaKnown RBP14.5□□□□□ -0.09
HMGA1-203ENST00000374116 PCMTD2Q9NV79 361 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 PDP2Q9P2J9 529 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 STOML1Q9UBI4 398 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 ZNF180Q9UJW8 692 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 TTLL3Q9Y4R7 772 aa14.5□□□□□ -0.09
HMGA1-203ENST00000374116 H3BRJ5 948 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 I6L893 689 aaPredicted RBP14.49□□□□□ -0.09
HMGA1-203ENST00000374116 CREB3O43889 395 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 METTL18O95568 372 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 ADRA1BP35368 520 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 PTDSS1P48651 473 aaKnown RBP14.49□□□□□ -0.09
HMGA1-203ENST00000374116 SLC7A9P82251 487 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 SLC18A2Q05940 514 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 SEMA5AQ13591 1074 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 DPYSQ14117 519 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 LGSNQ5TDP6 509 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 TTC39BQ5VTQ0 682 aaPredicted RBP14.49□□□□□ -0.09
HMGA1-203ENST00000374116 TCP10LQ8TDR4 215 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 HTR3CQ8WXA8 447 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 ZNF75CPQ92670 426 aaPredicted RBP14.49□□□□□ -0.09
HMGA1-203ENST00000374116 ASIC4Q96FT7 647 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 NUDCD1Q96RS6 583 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 FERMT1Q9BQL6 677 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 LINC00597Q9H2U6 94 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 DCLRE1BQ9H816 532 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 TMPRSS4Q9NRS4 437 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 RRN3Q9NYV6 651 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 TMCO1Q9UM00 188 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 ARHGAP26Q9UNA1 814 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 TRIM33Q9UPN9 1127 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 MFHAS1Q9Y4C4 1052 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 WNT6Q9Y6F9 365 aa14.49□□□□□ -0.09
HMGA1-203ENST00000374116 CUL9Q8IWT3 2517 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 MYOFQ9NZM1 2061 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 ANHXE9PGG2 379 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 ZNF189O75820 626 aaPredicted RBP14.48□□□□□ -0.09
HMGA1-203ENST00000374116 PIAS1O75925 651 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 STC2O76061 302 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 C1QAP02745 245 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 KLKB1P03952 638 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 FDFT1P37268 417 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 VHLP40337 213 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 CDK16Q00536 496 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 DEUP1Q05D60 604 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 TNK2Q07912 1038 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 GSTA3Q16772 222 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 TJAP1Q5JTD0 557 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 BEND5Q7L4P6 421 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 LRRC6Q86X45 466 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 SLC44A3Q8N4M1 653 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 CELF5Q8N6W0 485 aaKnown RBP14.48□□□□□ -0.09
HMGA1-203ENST00000374116 PTPRN2Q92932 1015 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 APOPT1Q96IL0 206 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 ANLNQ9NQW6 1124 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 DDIT4Q9NX09 232 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 DLGAP2Q9P1A6 1054 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 USH1CQ9Y6N9 552 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 ZFP37Q9Y6Q3 630 aaPredicted RBP14.48□□□□□ -0.09
HMGA1-203ENST00000374116 A0A0A0MRY4 1105 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 NVLO15381 856 aaKnown RBP14.48□□□□□ -0.09
HMGA1-203ENST00000374116 KRT37O76014 449 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 STK10O94804 968 aaKnown RBP14.48□□□□□ -0.09
HMGA1-203ENST00000374116 MOCS2O96007 188 aaPredicted RBP14.48□□□□□ -0.09
HMGA1-203ENST00000374116 APOEP02649 317 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 PYGBP11216 843 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 GM2AP17900 193 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 ADRA1DP25100 572 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 HCAR3P49019 387 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 RASSF2P50749 326 aa14.48□□□□□ -0.09
HMGA1-203ENST00000374116 EIF4EBP2Q13542 120 aaPredicted RBP14.48□□□□□ -0.09
HMGA1-203ENST00000374116 PAFAH1B3Q15102 231 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms