RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 DCAKDQ8WVC6 231 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 GATA5Q9BWX5 397 aaPredicted RBP16.49■□□□□ 0.23
SCAF1-201ENST00000360565 RHBDL2Q9NX52 303 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 CORO1CQ9ULV4 474 aaPredicted RBP16.49■□□□□ 0.23
SCAF1-201ENST00000360565 OR4Q2P0C623 313 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 NUP107P57740 925 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 DLG2Q15700 870 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 DPYSL2Q16555 572 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 ARHGAP17Q68EM7 881 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 MPP5Q8N3R9 675 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 NXNL1Q96CM4 212 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 CDK5RAP1Q96SZ6 601 aaKnown RBP16.49■□□□□ 0.23
SCAF1-201ENST00000360565 DCUN1D5Q9BTE7 237 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 SENP6Q9GZR1 1112 aaPredicted RBP16.49■□□□□ 0.23
SCAF1-201ENST00000360565 RMND5AQ9H871 391 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 IRAK4Q9NWZ3 460 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 MYH7P12883 1935 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 A0A0G2JLL6 359 aaPredicted RBP16.49■□□□□ 0.23
SCAF1-201ENST00000360565 TRAFD1O14545 582 aaPredicted RBP16.49■□□□□ 0.23
SCAF1-201ENST00000360565 PPEF2O14830 753 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 MT-CYBP00156 380 aaPredicted RBP16.49■□□□□ 0.23
SCAF1-201ENST00000360565 HGFP14210 728 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 CHN2P52757 468 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 FAM110CQ1W6H9 321 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 FAM98BQ52LJ0 330 aaKnown RBP16.49■□□□□ 0.23
SCAF1-201ENST00000360565 IL27RAQ6UWB1 636 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 PRRT2Q7Z6L0 340 aaPredicted RBP16.49■□□□□ 0.23
SCAF1-201ENST00000360565 AMIGO2Q86SJ2 522 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 UNC5BQ8IZJ1 945 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 DNAJB14Q8TBM8 379 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 PCED1BQ96HM7 432 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 CLIC5Q9NZA1 410 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 SLC17A6Q9P2U8 582 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 BTRCQ9Y297 605 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 PHLPP1O60346 1717 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 EME2A4GXA9 379 aaPredicted RBP16.48■□□□□ 0.23
SCAF1-201ENST00000360565 TK2O00142 265 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 SEC22BO75396 215 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 PRIM2P49643 509 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 CLCNKBP51801 687 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 NEK3P51956 506 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 TUSC3Q13454 348 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 STXBP5Q5T5C0 1151 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 RFWD3Q6PCD5 774 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 LENG8Q96PV6 779 aaPredicted RBP16.48■□□□□ 0.23
SCAF1-201ENST00000360565 NPAS2Q99743 824 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 FAM124BQ9H5Z6 455 aaPredicted RBP16.48■□□□□ 0.23
SCAF1-201ENST00000360565 EXOSC4Q9NPD3 245 aaKnown RBP16.48■□□□□ 0.23
SCAF1-201ENST00000360565 LIMD1Q9UGP4 676 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 SIX4Q9UIU6 781 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 TRIM38O00635 465 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 CPSF4O95639 269 aaKnown RBP16.48■□□□□ 0.23
SCAF1-201ENST00000360565 PTPN3P26045 913 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 EPHB3P54753 998 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 CDK18Q07002 472 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 SQLEQ14534 574 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 MON1AQ86VX9 555 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 HERC6Q8IVU3 1022 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 DHRSXQ8N5I4 330 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 NLGN2Q8NFZ4 835 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 OSCP1Q8WVF1 389 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 SPAG4Q9NPE6 437 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 COMMD8Q9NX08 183 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 TELO2Q9Y4R8 837 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 FGFR1P11362 822 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 TUFMP49411 452 aaKnown RBP16.48■□□□□ 0.23
SCAF1-201ENST00000360565 KLF1Q13351 362 aaPredicted RBP16.48■□□□□ 0.23
SCAF1-201ENST00000360565 PEX6Q13608 980 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 PSMD5Q16401 504 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 MAML3Q96JK9 1138 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 ZFRQ96KR1 1074 aaKnown RBP16.48■□□□□ 0.23
SCAF1-201ENST00000360565 AGAP2Q99490 1192 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 EBF4Q9BQW3 602 aa16.48■□□□□ 0.23
SCAF1-201ENST00000360565 PRPF19Q9UMS4 504 aaKnown RBP16.48■□□□□ 0.23
SCAF1-201ENST00000360565 MAGEC1O60732 1142 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 WEE1P30291 646 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 RAD23AP54725 363 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 GSTA3Q16772 222 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 NOMO2Q5JPE7 1267 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 NOL9Q5SY16 702 aaKnown RBP16.47■□□□□ 0.23
SCAF1-201ENST00000360565 ALS2Q96Q42 1657 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 HNRNPRO43390 633 aaKnown RBP16.47■□□□□ 0.23
SCAF1-201ENST00000360565 RGS20O76081 388 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 MPP1Q00013 466 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 SEMA5AQ13591 1074 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 CLVS1Q8IUQ0 354 aaPredicted RBP16.47■□□□□ 0.23
SCAF1-201ENST00000360565 CAMKK2Q96RR4 588 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 GBA3Q9H227 469 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 TXNRD2Q9NNW7 524 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 AAASQ9NRG9 546 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 ZNF358Q9NW07 568 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 PARNO95453 639 aaKnown RBP16.47■□□□□ 0.23
SCAF1-201ENST00000360565 GSTT1P30711 240 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 ABL2P42684 1182 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 DAOAP59103 153 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 ARHGAP1Q07960 439 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 BOP1Q14137 746 aaKnown RBP16.47■□□□□ 0.23
SCAF1-201ENST00000360565 GALNT3Q14435 633 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 TMEM110Q86TL2 294 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 FAM9CQ8IZT9 166 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms