RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CHRNA1P02708 482 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 HLA-DQB2P05538 268 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 ATP5BP06576 529 aaKnown RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 HSPA8P11142 646 aaKnown RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 SLC11A2P49281 568 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 GPR15P49685 360 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 PTK2BQ14289 1009 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 SLC9B1Q4ZJI4 515 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 KRT80Q6KB66 452 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 TIFABQ6ZNK6 161 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 IFNL1Q8IU54 200 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 MIEF2Q96C03 454 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 MLPHQ9BV36 600 aaPredicted RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 WDR6Q9NNW5 1121 aaKnown RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 TMLHEQ9NVH6 421 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 KANSL3Q9P2N6 904 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 GJD2Q9UKL4 321 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 DTNAQ9Y4J8 743 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 A0A0U1RQF3 1178 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 F8W810 466 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 AHSGP02765 367 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 PIK3R1P27986 724 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 PBX3P40426 434 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 ATN1P54259 1190 aaPredicted RBP11.3□□□□□ -0.6
SSU72-202ENST00000359060 TPD52P55327 224 aaPredicted RBP11.3□□□□□ -0.6
SSU72-202ENST00000359060 DUSP4Q13115 394 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 GALNT3Q14435 633 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 RBBP7Q16576 425 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 TMEM198Q66K66 360 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 OR10T2Q8NGX3 314 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 FBXO27Q8NI29 283 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 EME1Q96AY2 570 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 KCNK13Q9HB14 408 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 CASS4Q9NQ75 786 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 NDFIP2Q9NV92 336 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 STX18Q9P2W9 335 aaKnown RBP11.3□□□□□ -0.6
SSU72-202ENST00000359060 SUN2Q9UH99 717 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.3□□□□□ -0.6
SSU72-202ENST00000359060 TBKBP1A7MCY6 615 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 ANGPT2O15123 496 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 STX7O15400 261 aaKnown RBP11.3□□□□□ -0.6
SSU72-202ENST00000359060 TPST1O60507 370 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 ALDH7A1P49419 539 aaKnown RBP11.3□□□□□ -0.6
SSU72-202ENST00000359060 OXCT1P55809 520 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 ZNF177Q13360 481 aaPredicted RBP11.3□□□□□ -0.6
SSU72-202ENST00000359060 UPP1Q16831 310 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 PHTF2Q8N3S3 785 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 ZSCAN18Q8TBC5 510 aaPredicted RBP11.3□□□□□ -0.6
SSU72-202ENST00000359060 GDPD5Q8WTR4 605 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 PSMG2Q969U7 264 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 CCDC126Q96EE4 140 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 HMCESQ96FZ2 354 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 UROC1Q96N76 676 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 ANKRD27Q96NW4 1050 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 OXCT2Q9BYC2 517 aaPredicted RBP11.3□□□□□ -0.6
SSU72-202ENST00000359060 ARHGAP39Q9C0H5 1083 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 STN1Q9H668 368 aaKnown RBP11.3□□□□□ -0.6
SSU72-202ENST00000359060 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.3□□□□□ -0.67e-7■■■■□ 24.2
SSU72-202ENST00000359060 GABRQQ9UN88 632 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 TCAF1Q9Y4C2 921 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 AMHP03971 560 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 ITGB1P05556 798 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 ATP5F1P24539 256 aaPredicted RBP11.3□□□□□ -0.6
SSU72-202ENST00000359060 MAGEA6P43360 314 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 HCAR3P49019 387 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 TRIM32Q13049 653 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 STX5Q13190 355 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 CNSTQ6PJW8 725 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 PNPLA1Q8N8W4 532 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 OR52B2Q96RD2 323 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 C20orf27Q9GZN8 174 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 VTI1BQ9UEU0 232 aa11.3□□□□□ -0.6
SSU72-202ENST00000359060 MAGEA13PA6NCF6 341 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 TMEM114B3SHH9 223 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 PRRG1O14668 218 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 GABRDO14764 452 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 TLR5O60602 858 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 MAGEC1O60732 1142 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 SLC1A2P43004 574 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 NIPAL4Q0D2K0 466 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 VEPH1Q14D04 833 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 SMYD5Q6GMV2 418 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 C16orf59Q7L2K0 433 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 DEFB128Q7Z7B8 93 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 C14orf80Q86SX3 495 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 LRRTM3Q86VH5 581 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 RTL3Q8N8U3 475 aaKnown RBP11.29□□□□□ -0.6
SSU72-202ENST00000359060 ANKLE1Q8NAG6 615 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 LPCAT1Q8NF37 534 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 SH3TC2Q8TF17 1288 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 POLR1EQ9GZS1 481 aaKnown RBP11.29□□□□□ -0.6
SSU72-202ENST00000359060 SPATS2LQ9NUQ6 558 aaKnown RBP11.29□□□□□ -0.6
SSU72-202ENST00000359060 GEMIN8Q9NWZ8 242 aaKnown RBP11.29□□□□□ -0.6
SSU72-202ENST00000359060 LTA4HP09960 611 aaKnown RBP11.29□□□□□ -0.6
SSU72-202ENST00000359060 MORN1Q5T089 497 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 SLC24A5Q71RS6 500 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 ZC3HC1Q86WB0 502 aaKnown RBP11.29□□□□□ -0.6
SSU72-202ENST00000359060 JADE3Q92613 823 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 PTCD3Q96EY7 689 aaKnown RBP11.29□□□□□ -0.6
SSU72-202ENST00000359060 EGFL8Q99944 293 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms