RNA–Protein interactions for RNA: ENST00000356786.9

CCDC88B-202, Transcript of coiled-coil domain containing 88B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC88B, Length 4,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-202ENST00000356786 EPN2O95208 641 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 CYP3A7P24462 503 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 MPSTP25325 297 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 BACE1P56817 501 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 CYP4F2P78329 520 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 CYP4F3Q08477 520 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 RALGDSQ12967 914 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 SENP6Q9GZR1 1112 aaPredicted RBP19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 TKTL2Q9H0I9 626 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 OPTCQ9UBM4 332 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 C2P06681 752 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 FECHP22830 423 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 IL2P60568 153 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 ERAP2Q6P179 960 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 ADGRD1Q6QNK2 874 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 FAM183BPQ6ZVS7 135 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 AADATQ8N5Z0 425 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 C10orf53Q8N6V4 93 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 DNAJC1Q96KC8 554 aaKnown RBP19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 OSBPL6Q9BZF3 934 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 GRHL1Q9NZI5 618 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 DYRK1BQ9Y463 629 aa19.71■□□□□ 0.75
CCDC88B-202ENST00000356786 THP07101 528 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 FOXN2P32314 431 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 SLC26A3P40879 764 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 CDH13P55290 713 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 CTBP1Q13363 440 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 GALNT18Q6P9A2 607 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 CHMP1BQ7LBR1 199 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 WNT8BQ93098 351 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 OSMRQ99650 979 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 HSD17B14Q9BPX1 270 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 CAB39LQ9H9S4 337 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 CXorf21Q9HAI6 301 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 BCLAF3A2AJT9 711 aaKnown RBP19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 INSRRP14616 1297 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 NUP62P37198 522 aaPredicted RBP19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 CAPZA2P47755 286 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 QPRTQ15274 297 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 CARTPTQ16568 116 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 VWA5B1Q5TIE3 1220 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 CRTC3Q6UUV7 619 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 GK5Q6ZS86 529 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 ZNF670Q9BS34 389 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 POPDC2Q9HBU9 364 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 TRMT13Q9NUP7 481 aaKnown RBP19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 IKZF3Q9UKT9 509 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 TBX10O75333 385 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 SH3BGRLO75368 114 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 ALDH9A1P49189 494 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 HASPINQ8TF76 798 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 TRAPPC12Q8WVT3 735 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 LENG8Q96PV6 779 aaPredicted RBP19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 BUD23O43709 281 aaKnown RBP19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 CSNK2BP67870 215 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 SAMD7Q7Z3H4 446 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 OR5B17Q8NGF7 314 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 MYDGFQ969H8 173 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 REXO5Q96IC2 774 aaKnown RBP19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 FBXO5Q9UKT4 447 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 CNTNAP2Q9UHC6 1331 aa19.7■□□□□ 0.74
CCDC88B-202ENST00000356786 CLTBP09497 229 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 ACSM2AQ08AH3 577 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 ACSM2BQ68CK6 577 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 TBC1D21Q8IYX1 336 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 LPGAT1Q92604 370 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 KLHL28Q9NXS3 571 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 DGKBQ9Y6T7 804 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 OR1E1P30953 314 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 NOS2P35228 1153 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 CLCN5P51795 746 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 CDC42P60953 191 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 PRKCQQ04759 706 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 GNASQ5JWF2 1037 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 FNBP1LQ5T0N5 605 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 SYT12Q8IV01 421 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 CPT1BQ92523 772 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 OR12D3Q9UGF7 316 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 TK2O00142 265 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 PTGIRP43119 386 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 SEPHS1P49903 392 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 SHROOM1Q2M3G4 852 aaPredicted RBP19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 ZNF284Q2VY69 593 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 DDI2Q5TDH0 399 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 METTL21CQ5VZV1 264 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 DEFB132Q7Z7B7 95 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 EBF2Q9HAK2 575 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 CCNKO75909 580 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 TIGD2Q4W5G0 525 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 LRP10Q7Z4F1 713 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 ULBP1Q9BZM6 244 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 ARHGAP28Q9P2N2 729 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 ZNF112Q9UJU3 913 aa19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 WBP11Q9Y2W2 641 aaKnown RBP19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 TNPO3Q9Y5L0 923 aaKnown RBP19.69■□□□□ 0.74
CCDC88B-202ENST00000356786 AKAP5P24588 427 aa19.68■□□□□ 0.74
CCDC88B-202ENST00000356786 GRK3P35626 688 aa19.68■□□□□ 0.74
CCDC88B-202ENST00000356786 POLD2P49005 469 aa19.68■□□□□ 0.74
CCDC88B-202ENST00000356786 STX4Q12846 297 aa19.68■□□□□ 0.74
CCDC88B-202ENST00000356786 ITGA7Q13683 1181 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms