RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TPSB2P20231 275 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 RPS9P46781 194 aaKnown RBP18.23■□□□□ 0.51
SMC4-201ENST00000344722 PIK3CGP48736 1102 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 CLCN3P51790 818 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 NOMO1Q15155 1222 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 TPSAB1Q15661 275 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 TDRD10Q5VZ19 366 aaKnown RBP18.23■□□□□ 0.51
SMC4-201ENST00000344722 NEK10Q6ZWH5 1172 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 LRTOMTQ8WZ04 291 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 REXO5Q96IC2 774 aaKnown RBP18.23■□□□□ 0.51
SMC4-201ENST00000344722 EPB41L4BQ9H329 900 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 MST1RQ04912 1400 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 F5H5T6 163 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 HAT1O14929 419 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 FAM155BO75949 473 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 SLC25A27O95847 323 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 SPATA31C1P0DKV0 1188 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 ACADVLP49748 655 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 PRKG2Q13237 762 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 LDLRAP1Q5SW96 308 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 SDE2Q6IQ49 451 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 KCTD8Q6ZWB6 473 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 CBR4Q8N4T8 237 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 UBR7Q8N806 425 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 SLC47A1Q96FL8 570 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.23■□□□□ 0.51
SMC4-201ENST00000344722 CSDE1O75534 798 aaKnown RBP18.23■□□□□ 0.51
SMC4-201ENST00000344722 UMPSP11172 480 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 GSTM5P46439 218 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 IDH3AP50213 366 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 OXCT1P55809 520 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 ZNF177Q13360 481 aaPredicted RBP18.23■□□□□ 0.51
SMC4-201ENST00000344722 INTS5Q6P9B9 1019 aaKnown RBP18.23■□□□□ 0.51
SMC4-201ENST00000344722 GPSM1Q86YR5 675 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 DPP10Q8N608 796 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 SLC22A2O15244 555 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 CAP2P40123 477 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 UTS2BQ765I0 119 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 NT5DC4Q86YG4 428 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 SPPL2CQ8IUH8 684 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 OFCC1Q8IZS5 231 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 ANKRD52Q8NB46 1076 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 SMAD5Q99717 465 aaKnown RBP18.22■□□□□ 0.51
SMC4-201ENST00000344722 YBX3P16989 372 aaKnown RBP eCLIP18.22■□□□□ 0.511e-12■■■■□ 23.5
SMC4-201ENST00000344722 LHX1P48742 406 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 MAPKAPK3Q16644 382 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 FBXO47Q5MNV8 452 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 KREMEN1Q96MU8 473 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 CITED4Q96RK1 184 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 ERGIC3Q9Y282 383 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 FGRP09769 529 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 HNRNPLP14866 589 aaKnown RBP eCLIP18.22■□□□□ 0.512e-15■■■■■ 47.4
SMC4-201ENST00000344722 CPB2Q96IY4 423 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 ADAMTS13Q76LX8 1427 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 SERPINF2P08697 491 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 TFEBP19484 476 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 STAT5AP42229 794 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 SLC26A2P50443 739 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 FAM183BPQ6ZVS7 135 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 KRT74Q7RTS7 529 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 CMC1Q7Z7K0 106 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 TMEM161BQ8NDZ6 487 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 CNTNAP4Q9C0A0 1308 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 A0A0J9YYE9 177 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 H0YGN5 161 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 AZIN1O14977 448 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 PCNAP12004 261 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 SLC11A2P49281 568 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 ENPEPQ07075 957 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 RALGDSQ12967 914 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 ZNF621Q6ZSS3 439 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 FASTKD5Q7L8L6 764 aaKnown RBP18.22■□□□□ 0.51
SMC4-201ENST00000344722 ZBTB45Q96K62 511 aaPredicted RBP18.22■□□□□ 0.51
SMC4-201ENST00000344722 ADI1Q9BV57 179 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 SETD4Q9NVD3 440 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 KLK14Q9P0G3 267 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 ZMYM5Q9UJ78 669 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 NFS1Q9Y697 457 aa18.22■□□□□ 0.51
SMC4-201ENST00000344722 TMEM150BA6NC51 233 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 TADA2AO75478 443 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 GPIP06744 558 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 IL1R1P14778 569 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 DRICH1Q6PGQ1 229 aaPredicted RBP18.21■□□□□ 0.51
SMC4-201ENST00000344722 NARS2Q96I59 477 aaKnown RBP18.21■□□□□ 0.51
SMC4-201ENST00000344722 KATNAL1Q9BW62 490 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 FGFBP2Q9BYJ0 223 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 TMEM134Q9H6X4 195 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 CNTNAP2Q9UHC6 1331 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 STX11O75558 287 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 ATXN8OSP0DMR3 200 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 COL6A2P12110 1019 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 GPC1P35052 558 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 FGD3Q5JSP0 725 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 ZNF544Q6NX49 715 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 COQ10BQ9H8M1 238 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 ZNF222Q9UK12 451 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 BAG6P46379 1132 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 TPTEP56180 551 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 SRP54P61011 504 aaKnown RBP18.21■□□□□ 0.51
SMC4-201ENST00000344722 ECT2LQ008S8 904 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms