RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 FAM83CQ9BQN1 747 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 WDR83Q9BRX9 315 aaKnown RBP7.26□□□□□ -1.25
NUP43-201ENST00000340413 TDRD1Q9BXT4 1180 aaKnown RBP7.26□□□□□ -1.25
NUP43-201ENST00000340413 MFSD1Q9H3U5 465 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 SCUBE2Q9NQ36 999 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 NDFIP2Q9NV92 336 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 KLHL42Q9P2K6 505 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 STARD13Q9Y3M8 1113 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 SHROOM3Q8TF72 1996 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 EXOC1LA0A1B0GW35 172 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 TCRBV7S3A2A0A539 114 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 PFDN6O15212 129 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 RNF40O75150 1001 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 KRT37O76014 449 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 GLP2RO95838 553 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 ATXN1LP0C7T5 689 aaKnown RBP7.26□□□□□ -1.25
NUP43-201ENST00000340413 ADH5P11766 374 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 PABPC1P11940 636 aaKnown RBP7.26□□□□□ -1.25
NUP43-201ENST00000340413 OAS2P29728 719 aaKnown RBP7.26□□□□□ -1.25
NUP43-201ENST00000340413 CA8P35219 290 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 CSRP3P50461 194 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 PRKAA2P54646 552 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 SLC18A2Q05940 514 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 LMAN2Q12907 356 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 ENPP2Q13822 863 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 CRYMQ14894 314 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 SLC1A5Q15758 541 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 IL31Q6EBC2 164 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 UNC5AQ6ZN44 842 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 NLRP8Q86W28 1048 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 ADGRG2Q8IZP9 1017 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 PLCD3Q8N3E9 789 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 DCAKDQ8WVC6 231 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 CELF6Q96J87 481 aaKnown RBP7.26□□□□□ -1.25
NUP43-201ENST00000340413 FAM118BQ9BPY3 351 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 FAM126AQ9BYI3 521 aaPredicted RBP7.26□□□□□ -1.25
NUP43-201ENST00000340413 MUC3BQ9H195 1237 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 VPS51Q9UID3 782 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 NUDT5Q9UKK9 219 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 PSMD11O00231 422 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 CD160O95971 181 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 CSKP41240 450 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 MSH2P43246 934 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 IRAK1P51617 712 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 ADARP55265 1226 aaKnown RBP7.25□□□□□ -1.25
NUP43-201ENST00000340413 PPP2R2AP63151 447 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 KYNUQ16719 465 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 BBS9Q3SYG4 887 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 C3orf62Q6ZUJ4 267 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 LRRC6Q86X45 466 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 SH2D3CQ8N5H7 860 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 MZB1Q8WU39 189 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 FSD1LQ9BXM9 530 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 INTS10Q9NVR2 710 aaKnown RBP7.25□□□□□ -1.25
NUP43-201ENST00000340413 DUS2Q9NX74 493 aaKnown RBP7.25□□□□□ -1.25
NUP43-201ENST00000340413 SEPT10Q9P0V9 454 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 PHTF1Q9UMS5 762 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 TCRBV9S1A1TA0A576 114 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 GRXCR1A8MXD5 290 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 J3KR12 359 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 TMCC1O94876 653 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 ZWINTO95229 277 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 MPOP05164 745 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 ATP5BP06576 529 aaKnown RBP7.25□□□□□ -1.25
NUP43-201ENST00000340413 HNRNPLP14866 589 aaKnown RBP eCLIP7.25□□□□□ -1.25
NUP43-201ENST00000340413 PBX2P40425 430 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 RPS24P62847 133 aaKnown RBP7.25□□□□□ -1.25
NUP43-201ENST00000340413 ZXDBP98169 803 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 SLC10A7Q0GE19 358 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 SMAD4Q13485 552 aaKnown RBP7.25□□□□□ -1.25
NUP43-201ENST00000340413 ANKRD20A4Q4UJ75 823 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 MSS51Q4VC12 460 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 ARID3BQ8IVW6 561 aaPredicted RBP7.25□□□□□ -1.25
NUP43-201ENST00000340413 PGBD5Q8N414 524 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 CARNMT1Q8N4J0 409 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 GDPD5Q8WTR4 605 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 DDI1Q8WTU0 396 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 UCMAQ8WVF2 138 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 CERS2Q96G23 380 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 ZNF576Q9H609 170 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 C8orf33Q9H7E9 229 aaPredicted RBP7.25□□□□□ -1.25
NUP43-201ENST00000340413 ATP13A3Q9H7F0 1226 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 NLE1Q9NVX2 485 aaPredicted RBP7.25□□□□□ -1.25
NUP43-201ENST00000340413 MID2Q9UJV3 735 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 TMCO1Q9UM00 188 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 FAM170AA1A519 330 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 KCNK1O00180 336 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 POP4O95707 220 aaKnown RBP7.25□□□□□ -1.25
NUP43-201ENST00000340413 SNRPAP09012 282 aaKnown RBP7.25□□□□□ -1.25
NUP43-201ENST00000340413 ZNF30P17039 623 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 GCAP28676 217 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 ACVRL1P37023 503 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 GP5P40197 560 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 VPS41P49754 854 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 DHCR24Q15392 516 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 TTMPQ5BVD1 217 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 TCEAL5Q5H9L2 206 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 TSTD2Q5T7W7 516 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 GRAMD4Q6IC98 578 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 RFWD3Q6PCD5 774 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms