RNA–Protein interactions for RNA: ENST00000299240.10

TTC17-202, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best) BASIC

Gene TTC17, Length 3,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-202ENST00000299240 TBC1D4O60343 1298 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 IGLV3-25P01717 112 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 MGAT5Q09328 741 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 RAB33AQ14088 237 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 GRM3Q14832 879 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 ATXN2LQ8WWM7 1075 aaKnown RBP12.75□□□□□ -0.37
TTC17-202ENST00000299240 POLR1EQ9GZS1 481 aaKnown RBP12.75□□□□□ -0.37
TTC17-202ENST00000299240 CTSAP10619 480 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 CCNCP24863 283 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 GEMP55040 296 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 TMEM150AQ86TG1 271 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 PIM3Q86V86 326 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 BBS5Q8N3I7 341 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 DCBLD1Q8N8Z6 715 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 CCDC197Q8NCU1 140 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 KCTD4Q8WVF5 259 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 ESAMQ96AP7 390 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 EBF3Q9H4W6 596 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 TRHDEQ9UKU6 1024 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 TRIM33Q9UPN9 1127 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 TRANK1O15050 2925 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 FAM107AO95990 144 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 SKOR1P84550 965 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 ITGA9Q13797 1035 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 SPRED3Q2MJR0 410 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 PABPC1LQ4VXU2 614 aaKnown RBP12.74□□□□□ -0.37
TTC17-202ENST00000299240 RBM20Q5T481 1227 aaKnown RBP12.74□□□□□ -0.37
TTC17-202ENST00000299240 FSTL4Q6MZW2 842 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 ITIH5Q86UX2 942 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 VSIG1Q86XK7 387 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 OR4K2Q8NGD2 314 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 ZDHHC6Q9H6R6 413 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 SLC28A3Q9HAS3 691 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 PHTF1Q9UMS5 762 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 A0A096LPK6 155 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 TRAV19A0A0A6YYK7 116 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 TMCC1O94876 653 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 ABLIM3O94929 683 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 SERPINH1P50454 418 aaKnown RBP12.74□□□□□ -0.37
TTC17-202ENST00000299240 SIRPB2Q5JXA9 342 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 LY6G5CQ5SRR4 150 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 TIGD7Q6NT04 549 aaPredicted RBP12.74□□□□□ -0.37
TTC17-202ENST00000299240 ZNF689Q96CS4 500 aaPredicted RBP12.74□□□□□ -0.37
TTC17-202ENST00000299240 TSNARE1Q96NA8 513 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 GPR63Q9BZJ6 419 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 ARMCX1Q9P291 453 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 RUVBL2Q9Y230 463 aaKnown RBP12.74□□□□□ -0.37
TTC17-202ENST00000299240 BACE2Q9Y5Z0 518 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 VWA8A3KMH1 1905 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 IQCF5A8MTL0 148 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 TK2O00142 265 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 LEFTY2O00292 366 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 KIAA0355O15063 1070 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 SERINC3Q13530 473 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 ADGRD1Q6QNK2 874 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 LZTR1Q8N653 840 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 SPPL3Q8TCT6 385 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 FOXP3Q9BZS1 431 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.74□□□□□ -0.37
TTC17-202ENST00000299240 TMEM216Q9P0N5 145 aa12.74□□□□□ -0.37
TTC17-202ENST00000299240 RRP15Q9Y3B9 282 aaKnown RBP12.74□□□□□ -0.37
TTC17-202ENST00000299240 SCAMP1O15126 338 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 MTSS1O43312 755 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 PARNO95453 639 aaKnown RBP12.73□□□□□ -0.37
TTC17-202ENST00000299240 TPSB2P20231 275 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 CDK18Q07002 472 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 TPSAB1Q15661 275 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 PPP2R2DQ66LE6 453 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 NEPROQ6NW34 567 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 ANKS4BQ8N8V4 417 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 UBE2Q2Q8WVN8 375 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 VPS39Q96JC1 886 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 NKX2-4Q9H2Z4 354 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 MARCH4Q9P2E8 410 aaPredicted RBP12.73□□□□□ -0.37
TTC17-202ENST00000299240 IGSF9Q9P2J2 1179 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 DNMT3BQ9UBC3 853 aaKnown RBP12.73□□□□□ -0.37
TTC17-202ENST00000299240 CAPN7Q9Y6W3 813 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 GOLGA8QA0A0J9YX86 632 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 GOLGA8OA6NCC3 632 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 WASH3PC4AMC7 463 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 GOLGA8NF8WBI6 632 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 GRM2Q14416 872 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 CMTR2Q8IYT2 770 aaKnown RBP12.73□□□□□ -0.37
TTC17-202ENST00000299240 MRPL43Q8N983 215 aaKnown RBP12.73□□□□□ -0.37
TTC17-202ENST00000299240 RIN3Q8TB24 985 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 ZNF75CPQ92670 426 aaPredicted RBP12.73□□□□□ -0.37
TTC17-202ENST00000299240 SNX15Q9NRS6 342 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 SLC24A2Q9UI40 661 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 FAM237BA0A1B0GVD1 139 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 PLK4O00444 970 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 MTX2O75431 263 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 AHSGP02765 367 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 UGT2B4P06133 528 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 HLA-EP13747 358 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 DRD4P21917 467 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 FMO4P31512 558 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 MAGEA10P43363 369 aaPredicted RBP12.73□□□□□ -0.37
TTC17-202ENST00000299240 SERPINB4P48594 390 aa12.73□□□□□ -0.37
TTC17-202ENST00000299240 TSTA3Q13630 321 aaPredicted RBP12.73□□□□□ -0.37
TTC17-202ENST00000299240 CCDC85BQ15834 202 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms