RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 SYNDIG1LA6NDD5 238 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 CENPXA8MT69 81 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 DHX15O43143 795 aaKnown RBP11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 CST5P28325 142 aaPredicted RBP11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 GABRR2P28476 465 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 WEE1P30291 646 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 PPP3CCP48454 512 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 FAM187BQ17R55 369 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 TPGS2Q68CL5 300 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 ERLEC1Q96DZ1 483 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 GPR88Q9GZN0 384 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 KCTD10Q9H3F6 313 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 SPATA2Q9UM82 520 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 ADH1CP00326 375 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 EIF2S1P05198 315 aaKnown RBP11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 COX4I1P13073 169 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 CLEC16AQ2KHT3 1053 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 SAMD4BQ5PRF9 694 aaKnown RBP11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 GLIS3Q8NEA6 775 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 MAGEE2Q8TD90 523 aaPredicted RBP11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 VCPIP1Q96JH7 1222 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 ZFP42Q96MM3 310 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 RNF145Q96MT1 663 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 CADM1Q9BY67 442 aaKnown RBP11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 CLDND1Q9NY35 253 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 TBC1D14Q9P2M4 693 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 COQ6Q9Y2Z9 468 aa11.49□□□□□ -0.57
NPC1L1-201ENST00000289547 RBM47A0AV96 593 aaKnown RBP11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 SUPT3HB4E1H0 165 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 ALOX15P16050 662 aaPredicted RBP11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 POLR2EP19388 210 aaKnown RBP11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 FASTKQ14296 549 aaKnown RBP11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 CCDC153Q494R4 210 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 ARSHQ5FYA8 562 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 RRM2BQ7LG56 351 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 MCOLN2Q8IZK6 566 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 ALG3Q92685 438 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 FAXDC2Q96IV6 333 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 NSMCE2Q96MF7 247 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 ZIC5Q96T25 663 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 IARS2Q9NSE4 1012 aaKnown RBP11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 TBC1D3BA6NDS4 549 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 BTNL10A8MVZ5 291 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 TM7SF2O76062 418 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 NFIL3Q16649 462 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 SFRP1Q8N474 314 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 ZFAND2BQ8WV99 257 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 TOX2Q96NM4 488 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 C16orf70Q9BSU1 422 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 OSBPL11Q9BXB4 747 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 STN1Q9H668 368 aaKnown RBP11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 XPNPEP1Q9NQW7 623 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 TLR9Q9NR96 1032 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 TUBGCP4Q9UGJ1 667 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 SALL4Q9UJQ4 1053 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 SLC27A5Q9Y2P5 690 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 PCP4L1A6NKN8 68 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 ABHD2P08910 425 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 RFWD3Q6PCD5 774 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 LRRC55Q6ZSA7 311 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 PTAR1Q7Z6K3 402 aaPredicted RBP11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 FAM47BQ8NA70 645 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 ANKRD52Q8NB46 1076 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 KREMEN2Q8NCW0 462 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 C19orf18Q8NEA5 215 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 SUSD6Q92537 303 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 EDEM1Q92611 657 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 ULBP1Q9BZM6 244 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 FAM8A1Q9UBU6 413 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 PSMD13Q9UNM6 376 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 COL5A3P25940 1745 aaPredicted RBP11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 MYH1P12882 1939 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 FAM25AB3EWG3 89 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 FAM25CB3EWG5 89 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 FAM25GB3EWG6 89 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 IMPDH2P12268 514 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 ETS1P14921 441 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 SLC6A3Q01959 620 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 MPP3Q13368 585 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 ZACNQ401N2 412 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 STX19Q8N4C7 294 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 LENG9Q96B70 501 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 KCTD14Q9BQ13 255 aaPredicted RBP11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 OSBPL6Q9BZF3 934 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 LRRC19Q9H756 370 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 ELAC1Q9H777 363 aaKnown RBP11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 GPAMQ9HCL2 828 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 TBC1D13Q9NVG8 400 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 NKX1-2Q9UD57 310 aaPredicted RBP11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 CARD8Q9Y2G2 431 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 WDR37Q9Y2I8 494 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 ACOT9Q9Y305 439 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 ASB3Q9Y575 518 aa11.48□□□□□ -0.57
NPC1L1-201ENST00000289547 MYH13Q9UKX3 1938 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 EVPLLA8MZ36 301 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 SNPHO15079 494 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 PEX11AO75192 247 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 GJB6O95452 261 aa11.47□□□□□ -0.57
NPC1L1-201ENST00000289547 SERPINA6P08185 405 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms