RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 KIAA0895LQ68EN5 471 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 PRR23CQ6ZRP0 262 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 B4GALNT4Q76KP1 1039 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 ERN2Q76MJ5 926 aaKnown RBP6.62□□□□□ -1.35
CD44-204ENST00000279452 PARS2Q7L3T8 475 aaKnown RBP6.62□□□□□ -1.35
CD44-204ENST00000279452 SRLQ86TD4 932 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 TTC7BQ86TV6 843 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 ZC3H18Q86VM9 953 aaKnown RBP6.62□□□□□ -1.35
CD44-204ENST00000279452 SYT12Q8IV01 421 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 CCDC13Q8IYE1 715 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 PQLC3Q8N755 202 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 PLD5Q8N7P1 536 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 CADM4Q8NFZ8 388 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 EXD1Q8NHP7 514 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 P3H4Q92791 437 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 KLK6Q92876 244 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 BIRC7Q96CA5 298 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 FAF2Q96CS3 445 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 LRIG1Q96JA1 1093 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 ZNF599Q96NL3 588 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 LGMNQ99538 433 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 GTPBP2Q9BX10 602 aaKnown RBP6.62□□□□□ -1.35
CD44-204ENST00000279452 NUSAP1Q9BXS6 441 aaKnown RBP6.62□□□□□ -1.35
CD44-204ENST00000279452 OSBPL1AQ9BXW6 950 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 CEP41Q9BYV8 373 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 ATP13A3Q9H7F0 1226 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 DTLQ9NZJ0 730 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 SAE1Q9UBE0 346 aaPredicted RBP6.62□□□□□ -1.35
CD44-204ENST00000279452 SUSD2Q9UGT4 822 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 ITM2BQ9Y287 266 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 PPP2R2CQ9Y2T4 447 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.62□□□□□ -1.35
CD44-204ENST00000279452 PCDHGA5Q9Y5G8 931 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.62□□□□□ -1.35
CD44-204ENST00000279452 F5P12259 2224 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 hCG_1818297A0A087WSY0 165 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 A0A1W2PQU0 124 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 GOLGA6L9A6NEM1 432 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 C3orf70A6NLC5 250 aaPredicted RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 METTL12A8MUP2 240 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 MIF4GDA9UHW6 222 aaKnown RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 ZNF487B1APH4 448 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 H7C0C1 242 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 KCNK1O00180 336 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 RNF103O00237 685 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 MUSKO15146 869 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 BCAT2O15382 392 aaPredicted RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 PLRG1O43660 514 aaKnown RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 CCNB1P14635 433 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 PECAM1P16284 738 aaPredicted RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 PRLRP16471 622 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 TGM2P21980 687 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 HSPA9P38646 679 aaKnown RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 ATP5OP48047 213 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 C21orf59P57076 290 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 AP1S1P61966 158 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 FAM193AP78312 1265 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 LMNB2Q03252 620 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 GRM3Q14832 879 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 PDK1Q15118 436 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 TEAD4Q15561 434 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 CSRP2Q16527 193 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 DUOXA1Q1HG43 343 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 SETMARQ53H47 684 aaPredicted RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 PIP5KL1Q5T9C9 394 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 SEL1L2Q5TEA6 688 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 SLC9A4Q6AI14 798 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 AADACL2Q6P093 401 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 ERAP2Q6P179 960 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 LAYNQ6UX15 382 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 BZW1Q7L1Q6 419 aaKnown RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 RABEPKQ7Z6M1 372 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 PRPF39Q86UA1 669 aaKnown RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 NT5DC3Q86UY8 548 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 CAMK1DQ8IU85 385 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 LRRC49Q8IUZ0 686 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 RNF10Q8N5U6 811 aaKnown RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 GPR161Q8N6U8 529 aaKnown RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 LRRC57Q8N9N7 239 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 CXorf40AQ8TE69 158 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 TFB1MQ8WVM0 346 aaKnown RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 HDAC11Q96DB2 347 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 ZNF419Q96HQ0 510 aaPredicted RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 SERAC1Q96JX3 654 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 SLC6A18Q96N87 628 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 PSKH2Q96QS6 385 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 TUBGCP5Q96RT8 1024 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 WRAP53Q9BUR4 548 aaKnown RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 EDEM2Q9BV94 578 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 HDAC8Q9BY41 377 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 POLR1EQ9GZS1 481 aaKnown RBP6.61□□□□□ -1.35
CD44-204ENST00000279452 PCED1AQ9H1Q7 454 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 SUV39H2Q9H5I1 410 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 PARD6AQ9NPB6 346 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 FSCN3Q9NQT6 498 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 TMEM74BQ9NUR3 256 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 RBM22Q9NW64 420 aaKnown RBP eCLIP6.61□□□□□ -1.35
CD44-204ENST00000279452 PILRBQ9UKJ0 227 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 CDV3Q9UKY7 258 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms