RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 LMNB2Q03252 620 aa21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 WASHC5Q12768 1159 aa21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 CYP1B1Q16678 543 aa21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 WHAMMP3Q1A5X7 153 aa21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 CCDC137Q6PK04 289 aaKnown RBP21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 TMEM92Q6UXU6 159 aa21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 DPY19L3Q6ZPD9 716 aa21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 PGBD5Q8N414 524 aa21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 CCDC89Q8N998 374 aa21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 TSTD1Q8NFU3 115 aa21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 OR6K2Q8NGY2 324 aa21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 HEPHQ9BQS7 1158 aa21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 POLR3BQ9NW08 1133 aaPredicted RBP21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 IL36AQ9UHA7 158 aa21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 EVLQ9UI08 416 aaPredicted RBP21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 TRHDEQ9UKU6 1024 aa21.88■■□□□ 1.09
TSPAN9-208ENST00000640568 PDE2AO00408 941 aaPredicted RBP21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 MUSKO15146 869 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 ALOX15BO15296 676 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 POP4O95707 220 aaKnown RBP21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 IFNB1P01574 187 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 CHRNA3P32297 505 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 MAPK8P45983 427 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 KCNJ1P48048 391 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 CXCL12P48061 93 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 ITPRIPL1Q6GPH6 555 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 SRLQ86TD4 932 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 ZNF567Q8N184 647 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 TMEM105Q8N8V8 129 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 ATL2Q8NHH9 583 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 GRK7Q8WTQ7 553 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 TEKT5Q96M29 485 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 NUDCD1Q96RS6 583 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 USP29Q9HBJ7 922 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 BCCIPQ9P287 314 aaKnown RBP eCLIP21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 ATP8A1Q9Y2Q0 1164 aa21.87■■□□□ 1.09
TSPAN9-208ENST00000640568 C1QTNF3-AMACRE9PGA6 284 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 PRNPP04156 253 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 CES1P23141 567 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 COILP38432 576 aaPredicted RBP21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 RGRP47804 291 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 CSNK1DP48730 415 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 FNTAP49354 379 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 GDF10P55107 478 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 AP1S1P61966 158 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 GRM3Q14832 879 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 MYLK3Q32MK0 819 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 RALGPS1Q5JS13 557 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 ANKRD20A2Q5SQ80 823 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 ANKRD20A1Q5TYW2 823 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 ANKRD20A3Q5VUR7 823 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 ARHGEF18Q6ZSZ5 1173 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 PGBD3Q8N328 593 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 CHST14Q8NCH0 376 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 GRIN3AQ8TCU5 1115 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 ZNF419Q96HQ0 510 aaPredicted RBP21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 SPATA13Q96N96 652 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 RUNDC3BQ96NL0 473 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 HHIPQ96QV1 700 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 SEMA3CQ99985 751 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 RSPH14Q9UHP6 348 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 FEZ2Q9UHY8 353 aaPredicted RBP21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 MRFAP1Q9Y605 127 aa21.86■■□□□ 1.09
TSPAN9-208ENST00000640568 C5orf60A6NFR6 353 aa21.85■■□□□ 1.09
TSPAN9-208ENST00000640568 INSIG1O15503 277 aa21.85■■□□□ 1.09
TSPAN9-208ENST00000640568 OPHN1O60890 802 aa21.85■■□□□ 1.09
TSPAN9-208ENST00000640568 IL1BP01584 269 aa21.85■■□□□ 1.09
TSPAN9-208ENST00000640568 SATB1Q01826 763 aa21.85■■□□□ 1.09
TSPAN9-208ENST00000640568 P3H1Q32P28 736 aa21.85■■□□□ 1.09
TSPAN9-208ENST00000640568 FAM182AQ5T1J6 154 aa21.85■■□□□ 1.09
TSPAN9-208ENST00000640568 ZNF776Q68DI1 518 aaPredicted RBP21.85■■□□□ 1.09
TSPAN9-208ENST00000640568 CACUL1Q86Y37 369 aa21.85■■□□□ 1.09
TSPAN9-208ENST00000640568 KLHL7Q8IXQ5 586 aa21.85■■□□□ 1.09
TSPAN9-208ENST00000640568 PAF1Q8N7H5 531 aa21.85■■□□□ 1.09
TSPAN9-208ENST00000640568 CNTD1Q8N815 330 aa21.85■■□□□ 1.09
TSPAN9-208ENST00000640568 CCDC110Q8TBZ0 833 aa21.85■■□□□ 1.09
TSPAN9-208ENST00000640568 DDX47Q9H0S4 455 aaKnown RBP21.85■■□□□ 1.09
TSPAN9-208ENST00000640568 GLOD4Q9HC38 313 aa21.85■■□□□ 1.09
TSPAN9-208ENST00000640568 TTC24A2A3L6 582 aaPredicted RBP21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 LAMTOR5O43504 91 aa21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 PSMD8P48556 350 aa21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 COPAP53621 1224 aa21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 NRLP54845 237 aa21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 DSC2Q02487 901 aa21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 ARSIQ5FYB1 569 aa21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 FAM46CQ5VWP2 391 aa21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 TMPRSS6Q8IU80 811 aa21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 MMAAQ8IVH4 418 aaKnown RBP21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 HMGB4Q8WW32 186 aa21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 PRCCQ92733 491 aaPredicted RBP21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 LRIG1Q96JA1 1093 aa21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 OSBPL1AQ9BXW6 950 aa21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 RSPH9Q9H1X1 276 aaPredicted RBP21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 ATP13A3Q9H7F0 1226 aa21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 C2orf42Q9NWW7 574 aa21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 KMT2EQ8IZD2 1858 aa21.84■■□□□ 1.09
TSPAN9-208ENST00000640568 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.83■■□□□ 1.09
TSPAN9-208ENST00000640568 PRR33A8MZF0 331 aa21.83■■□□□ 1.09
TSPAN9-208ENST00000640568 LEFTY1O75610 366 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms