RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 ATP1A1P05023 1023 aaKnown RBP14.95□□□□□ -0.02
PNKP-221ENST00000627317 VAV1P15498 845 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 CXCR5P32302 372 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 PTGER3P43115 390 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 RHOAP61586 193 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 ZNF235Q14590 738 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 SPDYCQ5MJ68 293 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 PEAR1Q5VY43 1037 aaPredicted RBP14.95□□□□□ -0.02
PNKP-221ENST00000627317 TCEAL6Q6IPX3 200 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 PGBD3Q8N328 593 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 BBS5Q8N3I7 341 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 OR8D1Q8WZ84 308 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 TCEAL3Q969E4 200 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 ISG20Q96AZ6 181 aaKnown RBP14.95□□□□□ -0.02
PNKP-221ENST00000627317 TSGA13Q96PP4 275 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 BRD8Q9H0E9 1235 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 PRSS16Q9NQE7 514 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 VPS45Q9NRW7 570 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 SAE1Q9UBE0 346 aaPredicted RBP14.95□□□□□ -0.02
PNKP-221ENST00000627317 SEPT3Q9UH03 358 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 MCF2LO15068 1137 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 CEP104O60308 925 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 RNASEH1O60930 286 aaKnown RBP14.94□□□□□ -0.02
PNKP-221ENST00000627317 ZNF217O75362 1048 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 IGSF6O95976 241 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 IGLV3-19P01714 112 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 CCNCP24863 283 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 LIMK1P53667 647 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 SNRPD1P62314 119 aaKnown RBP14.94□□□□□ -0.02
PNKP-221ENST00000627317 OTUD4Q01804 1114 aaKnown RBP14.94□□□□□ -0.02
PNKP-221ENST00000627317 PPIDQ08752 370 aaKnown RBP14.94□□□□□ -0.02
PNKP-221ENST00000627317 AP1B1Q10567 949 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 BYSLQ13895 437 aaKnown RBP14.94□□□□□ -0.02
PNKP-221ENST00000627317 ELAVL3Q14576 367 aaKnown RBP14.94□□□□□ -0.02
PNKP-221ENST00000627317 PUM1Q14671 1186 aaKnown RBP eCLIP14.94□□□□□ -0.02
PNKP-221ENST00000627317 LBRQ14739 615 aaKnown RBP14.94□□□□□ -0.02
PNKP-221ENST00000627317 NOMO1Q15155 1222 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 C9orf64Q5T6V5 341 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 KIAA1324Q6UXG2 1013 aaKnown RBP14.94□□□□□ -0.02
PNKP-221ENST00000627317 LPCAT2Q7L5N7 544 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 DSG4Q86SJ6 1040 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 CACUL1Q86Y37 369 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 CCDC13Q8IYE1 715 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 STK40Q8N2I9 435 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 RYBPQ8N488 228 aaPredicted RBP14.94□□□□□ -0.02
PNKP-221ENST00000627317 TTC13Q8NBP0 860 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 OR2T3Q8NH03 318 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 ACTL9Q8TC94 416 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 NETO1Q8TDF5 533 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 TFB1MQ8WVM0 346 aaKnown RBP14.94□□□□□ -0.02
PNKP-221ENST00000627317 PTPRN2Q92932 1015 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 GDAP1L1Q96MZ0 367 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 WDR24Q96S15 920 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 LGMNQ99538 433 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 NAPGQ99747 312 aaPredicted RBP14.94□□□□□ -0.02
PNKP-221ENST00000627317 HAUS2Q9NVX0 235 aa14.94□□□□□ -0.02
PNKP-221ENST00000627317 TNRC6BQ9UPQ9 1833 aaKnown RBP14.94□□□□□ -0.02
PNKP-221ENST00000627317 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 CTAGE9A4FU28 777 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 H7C0C1 242 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 SLC30A4O14863 429 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 MATN3O15232 486 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 GSRP00390 522 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 MMP13P45452 471 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 ATP5OP48047 213 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 RENBPP51606 427 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 EIF3EP60228 445 aaKnown RBP14.93□□□□□ -0.02
PNKP-221ENST00000627317 CREB5Q02930 508 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 ZNF33AQ06730 810 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 KLF1Q13351 362 aaPredicted RBP14.93□□□□□ -0.02
PNKP-221ENST00000627317 CYTH1Q15438 398 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 CARD16Q5EG05 197 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 ATXN7L2Q5T6C5 722 aaPredicted RBP14.93□□□□□ -0.02
PNKP-221ENST00000627317 MARC1Q5VT66 337 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 ZNF776Q68DI1 518 aaPredicted RBP14.93□□□□□ -0.02
PNKP-221ENST00000627317 ERMP1Q7Z2K6 904 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 CYP2U1Q7Z449 544 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 ADAT2Q7Z6V5 191 aaKnown RBP14.93□□□□□ -0.02
PNKP-221ENST00000627317 ZC3H18Q86VM9 953 aaKnown RBP14.93□□□□□ -0.02
PNKP-221ENST00000627317 SLC13A5Q86YT5 568 aaPredicted RBP14.93□□□□□ -0.02
PNKP-221ENST00000627317 TMEFF1Q8IYR6 380 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 OR2AP1Q8NGE2 309 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 OR2A12Q8NGT7 310 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 LRRN4Q8WUT4 740 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 FATE1Q969F0 183 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 PBKQ96KB5 322 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 EXOC2Q96KP1 924 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 QKIQ96PU8 341 aaKnown RBP eCLIP14.93□□□□□ -0.02
PNKP-221ENST00000627317 SEPT10Q9P0V9 454 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 LHX3Q9UBR4 397 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 SNX12Q9UMY4 172 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 CYP8B1Q9UNU6 501 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 SDK1Q7Z5N4 2213 aa14.93□□□□□ -0.02
PNKP-221ENST00000627317 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.92□□□□□ -0.02
PNKP-221ENST00000627317 TCRBV7S2A1N4TA0A589 114 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 LNP1A1A4G5 178 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 HACD1B0YJ81 288 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 KCNK1O00180 336 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 ALOX15BO15296 676 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 ZNF821O75541 412 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms