RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 ZCWPW2A0A1B0GU75 182 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 MAGEB16A2A368 324 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 H0Y626 953 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 AP3B1O00203 1094 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 CXCL14O95715 111 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 IGLV3-27P01718 113 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 KLKB1P03952 638 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 TROVE2P10155 538 aaKnown RBP eCLIP10.06□□□□□ -0.8
VTA1-205ENST00000620996 MYL4P12829 197 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 CNTFP26441 200 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 GABRR2P28476 465 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 GNA12Q03113 381 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 SERINC3Q13530 473 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 GALNT3Q14435 633 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 C1orf53Q5VUE5 145 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 AFMIDQ63HM1 303 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 CGB2Q6NT52 195 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 PKN3Q6P5Z2 889 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 OTOAQ7RTW8 1153 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 MAB21L3Q8N8X9 362 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 OR6P1Q8NGX9 317 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 BLOC1S5Q8TDH9 187 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 SLC22A12Q96S37 553 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 CINPQ9BW66 212 aaPredicted RBP10.06□□□□□ -0.8
VTA1-205ENST00000620996 MARCOQ9UEW3 520 aaPredicted RBP10.06□□□□□ -0.8
VTA1-205ENST00000620996 AGO1Q9UL18 857 aaKnown RBP10.06□□□□□ -0.8
VTA1-205ENST00000620996 PLLPQ9Y342 182 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 IGLV3-10A0A075B6K4 115 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 ALDOAP04075 364 aaKnown RBP10.06□□□□□ -0.8
VTA1-205ENST00000620996 PRKCGP05129 697 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 HDCP19113 662 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 PPM1AP35813 382 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 MAPKAPK2P49137 400 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 SCNN1BP51168 640 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 SLC18A1P54219 525 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 MPP1Q00013 466 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 DLG2Q15700 870 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 TBC1D25Q3MII6 688 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 PREPLQ4J6C6 727 aaPredicted RBP10.06□□□□□ -0.8
VTA1-205ENST00000620996 GRTP1Q5TC63 336 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 PLPP4Q5VZY2 271 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 LINGO4Q6UY18 593 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 TMEM135Q86UB9 458 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 DENND6AQ8IWF6 608 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 BBS5Q8N3I7 341 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 BADQ92934 168 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 RMDN2Q96LZ7 410 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 UNKQ9C0B0 810 aaKnown RBP10.06□□□□□ -0.8
VTA1-205ENST00000620996 ZNF334Q9HCZ1 680 aaPredicted RBP10.06□□□□□ -0.8
VTA1-205ENST00000620996 SNX15Q9NRS6 342 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 KLC4Q9NSK0 619 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 MTO1Q9Y2Z2 717 aaKnown RBP10.06□□□□□ -0.8
VTA1-205ENST00000620996 CPQQ9Y646 472 aa10.06□□□□□ -0.8
VTA1-205ENST00000620996 DRGXA6NNA5 263 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 EDF1O60869 148 aaKnown RBP10.05□□□□□ -0.8
VTA1-205ENST00000620996 TBL1XO60907 577 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 FGBP02675 491 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 CNPP09543 421 aaKnown RBP10.05□□□□□ -0.8
VTA1-205ENST00000620996 EZRP15311 586 aaKnown RBP10.05□□□□□ -0.8
VTA1-205ENST00000620996 SYN1P17600 705 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 IL10RBQ08334 325 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 RAB33AQ14088 237 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 PDE1CQ14123 709 aaPredicted RBP10.05□□□□□ -0.8
VTA1-205ENST00000620996 SPRED3Q2MJR0 410 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 TEDDM1Q5T9Z0 273 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 TMCO4Q5TGY1 634 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 RNF219Q5W0B1 726 aaPredicted RBP10.05□□□□□ -0.8
VTA1-205ENST00000620996 ZNF470Q6ECI4 717 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 RNF168Q8IYW5 571 aaPredicted RBP10.05□□□□□ -0.8
VTA1-205ENST00000620996 HS6ST3Q8IZP7 471 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 OR52K2Q8NGK3 314 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 PLD4Q96BZ4 506 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 PRICKLE1Q96MT3 831 aaPredicted RBP10.05□□□□□ -0.8
VTA1-205ENST00000620996 PPP1R2P1Q96PQ5 205 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 POLR1EQ9GZS1 481 aaKnown RBP10.05□□□□□ -0.8
VTA1-205ENST00000620996 ZNF358Q9NW07 568 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 UBA2Q9UBT2 640 aaPredicted RBP10.05□□□□□ -0.8
VTA1-205ENST00000620996 ZNF232Q9UNY5 417 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 TYW5A2RUC4 315 aaKnown RBP10.05□□□□□ -0.8
VTA1-205ENST00000620996 TPD52L2O43399 206 aaKnown RBP10.05□□□□□ -0.8
VTA1-205ENST00000620996 TGM5O43548 720 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 EFCAB14O75071 495 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 PAMP19021 973 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 KCNA4P22459 653 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 SERPINH1P50454 418 aaKnown RBP10.05□□□□□ -0.8
VTA1-205ENST00000620996 USP10Q14694 798 aaKnown RBP10.05□□□□□ -0.8
VTA1-205ENST00000620996 ARTNQ5T4W7 220 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 PDPK2PQ6A1A2 396 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 FSTL4Q6MZW2 842 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 C6orf89Q6UWU4 347 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 ITIH5Q86UX2 942 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 PGBD5Q8N414 524 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 PNPLA1Q8N8W4 532 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 DPF3Q92784 378 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 SCYL1Q96KG9 808 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 TSNARE1Q96NA8 513 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 FAM210AQ96ND0 272 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 RBBP8Q99708 897 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 CORO1BQ9BR76 489 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 RMI1Q9H9A7 625 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms