RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 C1orf50Q9BV19 199 aa15□□□□□ -0.01
TNFRSF11A-206ENST00000617039 DENND2DQ9H6A0 471 aaPredicted RBP15□□□□□ -0.01
TNFRSF11A-206ENST00000617039 MID1IP1Q9NPA3 183 aa15□□□□□ -0.01
TNFRSF11A-206ENST00000617039 SCUBE2Q9NQ36 999 aa15□□□□□ -0.01
TNFRSF11A-206ENST00000617039 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15□□□□□ -0.01
TNFRSF11A-206ENST00000617039 FBXW11Q9UKB1 542 aa15□□□□□ -0.01
TNFRSF11A-206ENST00000617039 RNF112Q9ULX5 631 aa15□□□□□ -0.01
TNFRSF11A-206ENST00000617039 CDYLQ9Y232 598 aa15□□□□□ -0.01
TNFRSF11A-206ENST00000617039 hCG_2014768A0A024R1R8 64 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 TMEM88BA6NKF7 163 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 BTN3A1O00481 513 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 GPR39O43194 453 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 CA12O43570 354 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 S100BP04271 92 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 EEF1B2P24534 225 aaKnown RBP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ATP5C1P36542 298 aaKnown RBP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 CBX2Q14781 532 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 HPS6Q86YV9 775 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 CENPTQ96BT3 561 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 NPAS2Q99743 824 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 WASF2Q9Y6W5 498 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ATG2BQ96BY7 2078 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 BCLAF3A2AJT9 711 aaKnown RBP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 TIMM44O43615 452 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ATP5HO75947 161 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 SIX3O95343 332 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 SERPINE1P05121 402 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ARSAP15289 507 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 TBL3Q12788 808 aaKnown RBP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 KCNJ11Q14654 390 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 IMPG1Q17R60 797 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 PLEKHG4Q58EX7 1191 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ARL13AQ5H913 290 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 PPP1R15BQ5SWA1 713 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 DCLRE1AQ6PJP8 1040 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ARL14EPQ8N8R7 260 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 TRPV1Q8NER1 839 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 DNAJC1Q96KC8 554 aaKnown RBP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 QKIQ96PU8 341 aaKnown RBP eCLIP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 PPP1R10Q96QC0 940 aaKnown RBP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 SGIP1Q9BQI5 828 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 BTBD10Q9BSF8 475 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 COG4Q9H9E3 785 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 STX16-NPEPL1H3BU86 382 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 GNGT2O14610 69 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ENPP3O14638 875 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 SNAP91O60641 907 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 HLA-DQB2P05538 268 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 PTPN9P43378 593 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 SERPINH1P50454 418 aaKnown RBP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 BOP1Q14137 746 aaKnown RBP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 UGP2Q16851 508 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 RBM20Q5T481 1227 aaKnown RBP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 GLOD4Q9HC38 313 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 SCHIP1Q9P0W5 487 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 CRLS1Q9UJA2 301 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 STARD13Q9Y3M8 1113 aa14.99□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ABHD2P08910 425 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 FLOT2Q14254 428 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 PTPRNQ16849 979 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 TXNDC8Q6A555 127 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 IZUMO2Q6UXV1 221 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 LINC00523Q86TU6 105 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 NIPA2Q8N8Q9 360 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 OR4K2Q8NGD2 314 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 GFM2Q969S9 779 aaKnown RBP14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 GCNAQ96QF7 691 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ACOX2Q99424 681 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ADAM28Q9UKQ2 775 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 GNEQ9Y223 722 aaKnown RBP14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 FCF1Q9Y324 198 aaKnown RBP14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 AKAP10O43572 662 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 BPGMP07738 259 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 AP2B1P63010 937 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 NRG1Q02297 640 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 GRIK3Q13003 919 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 NRF1Q16656 503 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 PPM1LQ5SGD2 360 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 CNPY4Q8N129 248 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ZMIZ2Q8NF64 920 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 NKX1-2Q9UD57 310 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 TLL2Q9Y6L7 1015 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 SCN1AP35498 2009 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ITGBL1O95965 494 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 URODP06132 367 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 CKBP12277 381 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 GLDCP23378 1020 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 GHRHRQ02643 423 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ARHGEF7Q14155 803 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 FBXO27Q8NI29 283 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ING5Q8WYH8 240 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 TXLNGYQ9BZA5 131 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ZYG11BQ9C0D3 744 aa14.98□□□□□ -0.01
TNFRSF11A-206ENST00000617039 A0A0U1RQF3 1178 aa14.97□□□□□ -0.01
TNFRSF11A-206ENST00000617039 MTSS1O43312 755 aa14.97□□□□□ -0.01
TNFRSF11A-206ENST00000617039 TBL1XO60907 577 aa14.97□□□□□ -0.01
TNFRSF11A-206ENST00000617039 SERPIND1P05546 499 aa14.97□□□□□ -0.01
TNFRSF11A-206ENST00000617039 ABCE1P61221 599 aaKnown RBP14.97□□□□□ -0.01
TNFRSF11A-206ENST00000617039 HSPA14Q0VDF9 509 aa14.97□□□□□ -0.01
TNFRSF11A-206ENST00000617039 WASHC5Q12768 1159 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms