RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 MT-CYBP00156 380 aaPredicted RBP9.05□□□□□ -0.96
CCDC47-207ENST00000612558 RHOP08100 348 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 POU2F2P09086 479 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 BMP2P12643 396 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 PGAM1P18669 254 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 PRKCHP24723 683 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 AVPR1AP37288 418 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 ATP1A2P50993 1020 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 SGSHP51688 502 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 OXCT1P55809 520 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 OLIG2Q13516 323 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 TMED2Q15363 201 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 KBTBD12Q3ZCT8 623 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 STXBP5Q5T5C0 1151 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 GPR158Q5T848 1215 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 STEAP4Q687X5 459 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 IL31Q6EBC2 164 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 EXOC3L1Q86VI1 746 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 BPHLQ86WA6 291 aaPredicted RBP9.05□□□□□ -0.96
CCDC47-207ENST00000612558 BBS5Q8N3I7 341 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 CPXM2Q8N436 756 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.05□□□□□ -0.96
CCDC47-207ENST00000612558 OR7D4Q8NG98 312 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 OR52K2Q8NGK3 314 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 IMP4Q96G21 291 aaKnown RBP9.05□□□□□ -0.96
CCDC47-207ENST00000612558 ABHD8Q96I13 439 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 PAFAH2Q99487 392 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 TBL1YQ9BQ87 522 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 SPON2Q9BUD6 331 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 ACE2Q9BYF1 805 aaPredicted RBP9.05□□□□□ -0.96
CCDC47-207ENST00000612558 IL22Q9GZX6 179 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 TASP1Q9H6P5 420 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 PDFQ9HBH1 243 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 PLAC1Q9HBJ0 212 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 NT5MQ9NPB1 228 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 SYBUQ9NX95 663 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 MOCS1Q9NZB8 636 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 SAMD15Q9P1V8 674 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 PSMC3IPQ9P2W1 217 aaPredicted RBP9.05□□□□□ -0.96
CCDC47-207ENST00000612558 ZMYM5Q9UJ78 669 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 YBX2Q9Y2T7 364 aaKnown RBP9.05□□□□□ -0.96
CCDC47-207ENST00000612558 HCFC2Q9Y5Z7 792 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 ACTL7BQ9Y614 415 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 IKBKGQ9Y6K9 419 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 MYO9BQ13459 2157 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 CCDC195A0A1B0GUA6 201 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 E2F8A0AVK6 867 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 H0Y626 953 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 ZNF197O14709 1029 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 MOSPD3O75425 235 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 ALDH1A2O94788 518 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 C1QAP02745 245 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 POLBP06746 335 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 HOXD9P28356 352 aaPredicted RBP9.04□□□□□ -0.96
CCDC47-207ENST00000612558 ADRA1AP35348 466 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 CRADDP78560 199 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 ITKQ08881 620 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 ZNF235Q14590 738 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 RFTN1Q14699 578 aaPredicted RBP9.04□□□□□ -0.96
CCDC47-207ENST00000612558 TEAD2Q15562 447 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 MPP7Q5T2T1 576 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 RNF219Q5W0B1 726 aaPredicted RBP9.04□□□□□ -0.96
CCDC47-207ENST00000612558 CXorf57Q6NSI4 855 aaKnown RBP9.04□□□□□ -0.96
CCDC47-207ENST00000612558 RBM23Q86U06 439 aaKnown RBP9.04□□□□□ -0.96
CCDC47-207ENST00000612558 PRPF39Q86UA1 669 aaKnown RBP9.04□□□□□ -0.96
CCDC47-207ENST00000612558 LRRC6Q86X45 466 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 CCDC117Q8IWD4 279 aaPredicted RBP9.04□□□□□ -0.96
CCDC47-207ENST00000612558 CMTM8Q8IZV2 173 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 IPMKQ8NFU5 416 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 SLC44A1Q8WWI5 657 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 TTC17Q96AE7 1141 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 MRRFQ96E11 262 aaKnown RBP9.04□□□□□ -0.96
CCDC47-207ENST00000612558 TCEAL4Q96EI5 215 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 FSD1LQ9BXM9 530 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 CAPS2Q9BXY5 557 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 POLR1EQ9GZS1 481 aaKnown RBP9.04□□□□□ -0.96
CCDC47-207ENST00000612558 LMAN2LQ9H0V9 348 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 ATP13A1Q9HD20 1204 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 PIH1D1Q9NWS0 290 aaKnown RBP9.04□□□□□ -0.96
CCDC47-207ENST00000612558 SENP1Q9P0U3 644 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 MSRAQ9UJ68 235 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 NOTCH4Q99466 2003 aa9.04□□□□□ -0.96
CCDC47-207ENST00000612558 FAM237BA0A1B0GVD1 139 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 FAM159BA6NKW6 160 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 SCAMP3O14828 347 aaKnown RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 SHOX2O60902 331 aaPredicted RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 PMPCBO75439 489 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 LUC7L3O95232 432 aaKnown RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 INHBAP08476 426 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 KRT15P19012 456 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 MDH1P40925 334 aaKnown RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 MAXP61244 160 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 NIPAL4Q0D2K0 466 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 EFTUD2Q15029 972 aaKnown RBP eCLIP9.03□□□□□ -0.968e-6■□□□□ 8.1
CCDC47-207ENST00000612558 RAB30Q15771 203 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 SLC5A9Q2M3M2 681 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 MPPE1Q53F39 396 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 PRSS36Q5K4E3 855 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 SPANXN3Q5MJ09 141 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CERCAMQ5T4B2 595 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms