RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 STK19P49842 368 aaPredicted RBP19.63■□□□□ 0.73
SGMS1-208ENST00000608287 PLK1P53350 603 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 HDAC4P56524 1084 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 RPL7AP62424 266 aaKnown RBP19.63■□□□□ 0.73
SGMS1-208ENST00000608287 ZBED6P86452 979 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 SULT2A1Q06520 285 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 ARID5BQ14865 1188 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 PPP1R15BQ5SWA1 713 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 CDCP2Q5VXM1 449 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 INO80CQ6PI98 192 aaPredicted RBP19.63■□□□□ 0.73
SGMS1-208ENST00000608287 KANSL1Q7Z3B3 1105 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 TFAP2DQ7Z6R9 452 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 DNAAF5Q86Y56 855 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 RNF214Q8ND24 703 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 OR52K2Q8NGK3 314 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 FEM1AQ9BSK4 669 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 ABCG4Q9H172 646 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 MUC3BQ9H195 1237 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 KDM4CQ9H3R0 1056 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 SLCO3A1Q9UIG8 710 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 VPS28Q9UK41 221 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 CAPN11Q9UMQ6 739 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 TBC1D30Q9Y2I9 924 aa19.63■□□□□ 0.73
SGMS1-208ENST00000608287 IGLV3-10A0A075B6K4 115 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 TTC34A8MYJ7 566 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 CCP110O43303 1012 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 ATMINO43313 823 aaPredicted RBP19.62■□□□□ 0.73
SGMS1-208ENST00000608287 FTLP02792 175 aaPredicted RBP19.62■□□□□ 0.73
SGMS1-208ENST00000608287 GZMAP12544 262 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 GOT1P17174 413 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 DESP17661 470 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 C5AR1P21730 350 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 DUSP3P51452 185 aaPredicted RBP19.62■□□□□ 0.73
SGMS1-208ENST00000608287 ZNF143P52747 638 aaPredicted RBP19.62■□□□□ 0.73
SGMS1-208ENST00000608287 SCYL2Q6P3W7 929 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 CCDC81Q6ZN84 652 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 OR14C36Q8NHC7 312 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 SYN2Q92777 582 aaPredicted RBP19.62■□□□□ 0.73
SGMS1-208ENST00000608287 ALG14Q96F25 216 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 EBF2Q9HAK2 575 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 PARVAQ9NVD7 372 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 OR12D3Q9UGF7 316 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 SLC25A13Q9UJS0 675 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 SSUH2Q9Y2M2 353 aa19.62■□□□□ 0.73
SGMS1-208ENST00000608287 LUC7L2Q9Y383 392 aaKnown RBP19.62■□□□□ 0.73
SGMS1-208ENST00000608287 PYCARD-AS1I3L0S3 204 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 CBFA2T2O43439 604 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 LATO43561 262 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 SIGLEC6O43699 453 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 OPA1O60313 960 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 SIN3BO75182 1162 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 RTN2O75298 545 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 GYPCP04921 128 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 OR1E1P30953 314 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 SLC8A1P32418 973 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 ADPRHP54922 357 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 STAT4Q14765 748 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 SETD3Q86TU7 594 aaPredicted RBP19.61■□□□□ 0.73
SGMS1-208ENST00000608287 MMAAQ8IVH4 418 aaKnown RBP19.61■□□□□ 0.73
SGMS1-208ENST00000608287 CCDC185Q8N715 623 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 OR4C6Q8NH72 309 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 CNPY3Q9BT09 278 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.61■□□□□ 0.73
SGMS1-208ENST00000608287 ZYG11BQ9C0D3 744 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 SERGEFQ9UGK8 458 aa19.61■□□□□ 0.73
SGMS1-208ENST00000608287 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.61■□□□□ 0.738e-9■□□□□ 8.2
SGMS1-208ENST00000608287 BZW2Q9Y6E2 419 aaKnown RBP19.61■□□□□ 0.73
SGMS1-208ENST00000608287 ITIH6Q6UXX5 1313 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 TBC1D3DA0A087WVF3 549 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 TBC1D3IA0A087WXS9 549 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 TBC1D3EA0A087X179 549 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 TBC1D3KA0A087X1G2 549 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 EDDM13A0A1B0GTR0 161 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 TBC1D3FA6NER0 549 aaPredicted RBP19.6■□□□□ 0.73
SGMS1-208ENST00000608287 TBC1D3LB9A6J9 549 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 CSO75390 466 aaKnown RBP19.6■□□□□ 0.73
SGMS1-208ENST00000608287 SERPING1P05155 500 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 TBC1D3HP0C7X1 549 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 CKMT1AP12532 417 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 MLLT3P42568 568 aaPredicted RBP19.6■□□□□ 0.73
SGMS1-208ENST00000608287 MAMLD1Q13495 774 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 HGSNATQ68CP4 663 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 TBC1D3GQ6DHY5 549 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 TBC1D3CQ6IPX1 549 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 PLEKHA7Q6IQ23 1121 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 RWDD4Q6NW29 188 aaKnown RBP19.6■□□□□ 0.73
SGMS1-208ENST00000608287 ZNF574Q6ZN55 896 aaPredicted RBP19.6■□□□□ 0.73
SGMS1-208ENST00000608287 ATG14Q6ZNE5 492 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 SLFN11Q7Z7L1 901 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 VPS36Q86VN1 386 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 TBC1D3Q8IZP1 549 aaPredicted RBP19.6■□□□□ 0.73
SGMS1-208ENST00000608287 NTAN1Q96AB6 310 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 ZNF653Q96CK0 615 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 OSBPL2Q9H1P3 480 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 ASCL3Q9NQ33 180 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 OR51B4Q9Y5P0 310 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 DOCK4Q8N1I0 1966 aa19.6■□□□□ 0.73
SGMS1-208ENST00000608287 C10orf142B7Z368 130 aa19.59■□□□□ 0.73
SGMS1-208ENST00000608287 SLC7A4O43246 635 aa19.59■□□□□ 0.73
SGMS1-208ENST00000608287 RNGTTO60942 597 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms