RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ACTL7AQ9Y615 435 aa17.9■□□□□ 0.46
SHKBP1-224ENST00000600718 SNAP91O60641 907 aa17.89■□□□□ 0.45
SHKBP1-224ENST00000600718 ALDH1A2O94788 518 aa17.89■□□□□ 0.45
SHKBP1-224ENST00000600718 TPH1P17752 444 aa17.89■□□□□ 0.45
SHKBP1-224ENST00000600718 LMAN2Q12907 356 aa17.89■□□□□ 0.45
SHKBP1-224ENST00000600718 NR1H3Q13133 447 aa17.89■□□□□ 0.45
SHKBP1-224ENST00000600718 ARMC3Q5W041 872 aa17.89■□□□□ 0.45
SHKBP1-224ENST00000600718 ADGRD1Q6QNK2 874 aa17.89■□□□□ 0.45
SHKBP1-224ENST00000600718 TTC17Q96AE7 1141 aa17.89■□□□□ 0.45
SHKBP1-224ENST00000600718 DOCK6Q96HP0 2047 aa17.89■□□□□ 0.45
SHKBP1-224ENST00000600718 LINC00597Q9H2U6 94 aa17.89■□□□□ 0.45
SHKBP1-224ENST00000600718 SPHK2Q9NRA0 654 aa17.89■□□□□ 0.45
SHKBP1-224ENST00000600718 VPS51Q9UID3 782 aa17.89■□□□□ 0.45
SHKBP1-224ENST00000600718 MYO7AQ13402 2215 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 FAM237BA0A1B0GVD1 139 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 ATP9BO43861 1147 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 GLP2RO95838 553 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 CD160O95971 181 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 C1QAP02745 245 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 SERPINF2P08697 491 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 FRG1Q14331 258 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 PCSK7Q16549 785 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 TCEAL5Q5H9L2 206 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 PCID2Q5JVF3 399 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 RETSATQ6NUM9 610 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 ANKRD54Q6NXT1 300 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 KDM7AQ6ZMT4 941 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 TAOK1Q7L7X3 1001 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 TMEM135Q86UB9 458 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 ADGRG2Q8IZP9 1017 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 APCDD1Q8J025 514 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 PAFAH2Q99487 392 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 TRIM56Q9BRZ2 755 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 RASSF4Q9H2L5 321 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 TBK1Q9UHD2 729 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 CLEC4EQ9ULY5 219 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 SOX13Q9UN79 622 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 IKBKGQ9Y6K9 419 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 CXorf51AA0A1B0GTR3 108 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 LOC285095A0A1B0GVY8 99 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 FAM159BA6NKW6 160 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 VGLL3A8MV65 326 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 USP1O94782 785 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 EPOP01588 193 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 NSUN2Q08J23 767 aaKnown RBP eCLIP17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 IHHQ14623 411 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 CRYMQ14894 314 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 EFTUD2Q15029 972 aaKnown RBP eCLIP17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 ZNF449Q6P9G9 518 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 LINGO4Q6UY18 593 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 LRRC6Q86X45 466 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 NPAS3Q8IXF0 933 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 CYP4X1Q8N118 509 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 SLC44A1Q8WWI5 657 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 LMLNQ96KR4 655 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 KIFC1Q9BW19 673 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 BBS2Q9BXC9 721 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 GDE1Q9NZC3 331 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 RPS6KL1Q9Y6S9 549 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 FAM169AQ9Y6X4 670 aa17.88■□□□□ 0.45
SHKBP1-224ENST00000600718 TTC24A2A3L6 582 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-224ENST00000600718 TMCC1O94876 653 aa17.87■□□□□ 0.45
SHKBP1-224ENST00000600718 CR2P20023 1033 aa17.87■□□□□ 0.45
SHKBP1-224ENST00000600718 HPDP32754 393 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-224ENST00000600718 PPP2R2AP63151 447 aa17.87■□□□□ 0.45
SHKBP1-224ENST00000600718 TMED2Q15363 201 aa17.87■□□□□ 0.45
SHKBP1-224ENST00000600718 KDELC2Q7Z4H8 507 aa17.87■□□□□ 0.45
SHKBP1-224ENST00000600718 PTCD2Q8WV60 388 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-224ENST00000600718 DCAKDQ8WVC6 231 aa17.87■□□□□ 0.45
SHKBP1-224ENST00000600718 MRRFQ96E11 262 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-224ENST00000600718 FEM1CQ96JP0 617 aa17.87■□□□□ 0.45
SHKBP1-224ENST00000600718 NUDCD1Q96RS6 583 aa17.87■□□□□ 0.45
SHKBP1-224ENST00000600718 MARK1Q9P0L2 795 aa17.87■□□□□ 0.45
SHKBP1-224ENST00000600718 WNT6Q9Y6F9 365 aa17.87■□□□□ 0.45
SHKBP1-224ENST00000600718 LAMA2P24043 3122 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-224ENST00000600718 CHD9Q3L8U1 2897 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 NEDD8-MDP1E9PL57 170 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 INSIG1O15503 277 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 INHBAP08476 426 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 HOXB8P17481 243 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 CD70P32970 193 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 SLC1A5Q15758 541 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 PLEKHG6Q3KR16 790 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 ANKRD20A4Q4UJ75 823 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 PKN3Q6P5Z2 889 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 TRMT10BQ6PF06 316 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 SYCE2Q6PIF2 218 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 METTL3Q86U44 580 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 EXOC3L1Q86VI1 746 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 SLC26A11Q86WA9 606 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 FGF13Q92913 245 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 SMARCD2Q92925 531 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 IFT43Q96FT9 208 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 APOL5Q9BWW9 433 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 NOD2Q9HC29 1040 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 MRM3Q9HC36 420 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 SCUBE2Q9NQ36 999 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 LMCD1Q9NZU5 365 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 ACTL7BQ9Y614 415 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 MYO1CO00159 1063 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms