RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 APOC2P02655 101 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 MX2P20592 715 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 C5AR1P21730 350 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 ACSL1P33121 698 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 PSMD8P48556 350 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 DNA2P51530 1060 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 RHOAP61586 193 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 SNRPD1P62314 119 aaKnown RBP13.94□□□□□ -0.18
VRK3-219ENST00000600137 PDK1Q15118 436 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 PRKD1Q15139 912 aaPredicted RBP13.94□□□□□ -0.18
VRK3-219ENST00000600137 RPS6KA1Q15418 735 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 PLK5Q496M5 336 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 ODF2Q5BJF6 829 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 ALG1LQ6GMV1 187 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 USP30Q70CQ3 517 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 SRLQ86TD4 932 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 KBTBD6Q86V97 674 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 MGME1Q9BQP7 344 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 NEUROG2Q9H2A3 272 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 IL36AQ9UHA7 158 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 SCML1Q9UN30 329 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 ANKRD36A6QL64 1941 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 ZNF292O60281 2723 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 TNRC6BQ9UPQ9 1833 aaKnown RBP13.93□□□□□ -0.18
VRK3-219ENST00000600137 A0A1W2PP55 124 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 RNASEH1O60930 286 aaKnown RBP13.93□□□□□ -0.18
VRK3-219ENST00000600137 ADH1BP00325 375 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 DNTTP04053 509 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 TAS2R38P59533 333 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 IFI35P80217 286 aaPredicted RBP13.93□□□□□ -0.18
VRK3-219ENST00000600137 CNTN1Q12860 1018 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 ZBTB17Q13105 803 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 NOMO1Q15155 1222 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 MARC1Q5VT66 337 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 CCDC13Q8IYE1 715 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 SLC35F6Q8N357 371 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 ARRDC2Q8TBH0 407 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 ACTL9Q8TC94 416 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 TOE1Q96GM8 510 aaKnown RBP13.93□□□□□ -0.18
VRK3-219ENST00000600137 LRIG1Q96JA1 1093 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 CCDC114Q96M63 670 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 GDAP1L1Q96MZ0 367 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 ALS2CR12Q96Q35 445 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 CARD9Q9H257 536 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 FBXL12Q9NXK8 326 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 SEPT3Q9UH03 358 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 R3HDM2Q9Y2K5 976 aaKnown RBP13.93□□□□□ -0.18
VRK3-219ENST00000600137 ATP8A1Q9Y2Q0 1164 aa13.93□□□□□ -0.18
VRK3-219ENST00000600137 KCNK1O00180 336 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 KRIT1O00522 736 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 ENC1O14682 589 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 FANCGO15287 622 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 ZBTB24O43167 697 aaPredicted RBP13.92□□□□□ -0.18
VRK3-219ENST00000600137 IGSF6O95976 241 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 JCHAINP01591 159 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 PRNPP04156 253 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 CCNB1P14635 433 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 CD6P30203 668 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 MMP13P45452 471 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 RECQLP46063 649 aaPredicted RBP13.92□□□□□ -0.18
VRK3-219ENST00000600137 RENBPP51606 427 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 MAXP61244 160 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 OTUD4Q01804 1114 aaKnown RBP13.92□□□□□ -0.18
VRK3-219ENST00000600137 NIPAL4Q0D2K0 466 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 WASHC5Q12768 1159 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 XRCC4Q13426 336 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 BYSLQ13895 437 aaKnown RBP13.92□□□□□ -0.18
VRK3-219ENST00000600137 SIM2Q14190 667 aaPredicted RBP13.92□□□□□ -0.18
VRK3-219ENST00000600137 SIX1Q15475 284 aaPredicted RBP13.92□□□□□ -0.18
VRK3-219ENST00000600137 POM121L1PQ3SYA9 428 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 ZNF569Q5MCW4 686 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 PIP5KL1Q5T9C9 394 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 AGBL4Q5VU57 503 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 FAM46CQ5VWP2 391 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 PMS2CLQ68D20 193 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 TIGD7Q6NT04 549 aaPredicted RBP13.92□□□□□ -0.18
VRK3-219ENST00000600137 NCEH1Q6PIU2 408 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 ZC3H14Q6PJT7 736 aaKnown RBP13.92□□□□□ -0.18
VRK3-219ENST00000600137 DSG4Q86SJ6 1040 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 ZSWIM9Q86XI8 627 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 SLC41A1Q8IVJ1 513 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 C17orf53Q8N3J3 647 aaPredicted RBP13.92□□□□□ -0.18
VRK3-219ENST00000600137 HDDC3Q8N4P3 179 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 CCNYQ8ND76 341 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 GRIN3AQ8TCU5 1115 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 P3H4Q92791 437 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 HAUS1Q96CS2 278 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 CINPQ9BW66 212 aaPredicted RBP13.92□□□□□ -0.18
VRK3-219ENST00000600137 BRD8Q9H0E9 1235 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 ZDHHC6Q9H6R6 413 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 C10orf88Q9H8K7 445 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 NT5MQ9NPB1 228 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 RBM22Q9NW64 420 aaKnown RBP eCLIP13.92□□□□□ -0.18
VRK3-219ENST00000600137 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.92□□□□□ -0.18
VRK3-219ENST00000600137 FZD4Q9ULV1 537 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 JRKLQ9Y4A0 524 aa13.92□□□□□ -0.18
VRK3-219ENST00000600137 FARP1Q9Y4F1 1045 aaPredicted RBP13.92□□□□□ -0.18
VRK3-219ENST00000600137 RIF1Q5UIP0 2472 aaKnown RBP13.92□□□□□ -0.18
VRK3-219ENST00000600137 EP300Q09472 2414 aaPredicted RBP13.92□□□□□ -0.18
VRK3-219ENST00000600137 C1QTNF3-AMACRE9PGA6 284 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms