RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 FSCN3Q9NQT6 498 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 IPO11Q9UI26 975 aaKnown RBP10.24□□□□□ -0.77
BRCA1-227ENST00000591849 PCDHA13Q9Y5I0 950 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 EPN1Q9Y6I3 576 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-227ENST00000591849 EML5Q05BV3 1969 aa10.24□□□□□ -0.77
BRCA1-227ENST00000591849 CHD8Q9HCK8 2581 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 KMT2BQ9UMN6 2715 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-227ENST00000591849 THADAQ6YHU6 1953 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 LNP1A1A4G5 178 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 DCDC2BA2VCK2 349 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 LRRD1A4D1F6 860 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 J3KR12 359 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 PRAMEF11O60813 436 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 OPHN1O60890 802 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 CD160O95971 181 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 CTSLP07711 333 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 C7P10643 843 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 GKP32189 559 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 MAN1A1P33908 653 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 DRD3P35462 400 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 SLC1A1P43005 524 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 CSNK1EP49674 416 aaKnown RBP10.23□□□□□ -0.77
BRCA1-227ENST00000591849 RENBPP51606 427 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 AFF3P51826 1226 aaKnown RBP10.23□□□□□ -0.77
BRCA1-227ENST00000591849 LIMK1P53667 647 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 IL10RBQ08334 325 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 DPYSQ14117 519 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 CYTH1Q15438 398 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 ATP13A4Q4VNC1 1196 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 ZNF805Q5CZA5 627 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 PEAR1Q5VY43 1037 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-227ENST00000591849 GDPD4Q6W3E5 623 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 CYP4V2Q6ZWL3 525 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-227ENST00000591849 ATPAF2Q8N5M1 289 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-227ENST00000591849 FEM1CQ96JP0 617 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 SERAC1Q96JX3 654 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 KLHL32Q96NJ5 620 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 BAG1Q99933 345 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-227ENST00000591849 OSBPL1AQ9BXW6 950 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 HDAC8Q9BY41 377 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 ZDHHC5Q9C0B5 715 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 PREBQ9HCU5 417 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 RXFP3Q9NSD7 469 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 KLHL11Q9NVR0 708 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 RCOR3Q9P2K3 495 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-227ENST00000591849 IMPACTQ9P2X3 320 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 GON4LQ3T8J9 2241 aa10.23□□□□□ -0.77
BRCA1-227ENST00000591849 A0A1B0GVT2 93 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 A0A1W2PPC4 97 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 SOWAHDA6NJG2 315 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 C16orf96A6NNT2 1141 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 SLC31A1O15431 190 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 PLRG1O43660 514 aaKnown RBP10.22□□□□□ -0.77
BRCA1-227ENST00000591849 RNGTTO60942 597 aaKnown RBP10.22□□□□□ -0.77
BRCA1-227ENST00000591849 ZNF821O75541 412 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-227ENST00000591849 NDUFA10O95299 355 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 KRT1P04264 644 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 UGT2B4P06133 528 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 ITGB7P26010 798 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 CDC25BP30305 580 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 NUDT1P36639 197 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 TAS2R40P59535 323 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 RACK1P63244 317 aaKnown RBP10.22□□□□□ -0.77
BRCA1-227ENST00000591849 MMRN1Q13201 1228 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 ZNF235Q14590 738 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 RFTN1Q14699 578 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-227ENST00000591849 LBRQ14739 615 aaKnown RBP10.22□□□□□ -0.77
BRCA1-227ENST00000591849 STAT4Q14765 748 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 GRM3Q14832 879 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 SETMARQ53H47 684 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-227ENST00000591849 AGBL4Q5VU57 503 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 NEK5Q6P3R8 708 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 IL27RAQ6UWB1 636 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 KIAA1328Q86T90 577 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 TTC7BQ86TV6 843 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 CPNE8Q86YQ8 564 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 ARHGAP12Q8IWW6 846 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 TXLNBQ8N3L3 684 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 MINDY1Q8N5J2 469 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 EXOC2Q96KP1 924 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 ZNF830Q96NB3 372 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-227ENST00000591849 CAPN10Q9HC96 672 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 TM9SF3Q9HD45 589 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 ETNK2Q9NVF9 386 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 HAUS2Q9NVX0 235 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 SEPT3Q9UH03 358 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 MFHAS1Q9Y4C4 1052 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 WASF2Q9Y6W5 498 aa10.22□□□□□ -0.77
BRCA1-227ENST00000591849 A0A1W2PQU0 124 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 MAGEC1O60732 1142 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 MTA2O94776 668 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 CER1O95813 267 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 IGHV4-34P06331 123 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 CD48P09326 243 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 ADRB3P13945 408 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 KDELR1P24390 212 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 AKT2P31751 481 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 SCNN1BP51168 640 aa10.21□□□□□ -0.77
BRCA1-227ENST00000591849 ITKQ08881 620 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms