RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 HMGB4Q8WW32 186 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 MRGPRX1Q96LB2 322 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 HHIPQ96QV1 700 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 WDR24Q96S15 920 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 HERPUD2Q9BSE4 406 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 CPEB1Q9BZB8 566 aaKnown RBP19.87■□□□□ 0.77
CIRBP-220ENST00000588917 MTG2Q9H4K7 406 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 POLR3BQ9NW08 1133 aaPredicted RBP19.87■□□□□ 0.77
CIRBP-220ENST00000588917 RBM22Q9NW64 420 aaKnown RBP eCLIP19.87■□□□□ 0.772e-8■■■□□ 16.7
CIRBP-220ENST00000588917 IL36AQ9UHA7 158 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 SAR1BQ9Y6B6 198 aa19.87■□□□□ 0.77
CIRBP-220ENST00000588917 EP300Q09472 2414 aaPredicted RBP19.86■□□□□ 0.77
CIRBP-220ENST00000588917 KIF2AO00139 706 aaPredicted RBP19.86■□□□□ 0.77
CIRBP-220ENST00000588917 ZNF217O75362 1048 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 ADH1BP00325 375 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 JCHAINP01591 159 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 RBP3P10745 1247 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 VAV1P15498 845 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 GABRG2P18507 467 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 CCNHP51946 323 aaPredicted RBP19.86■□□□□ 0.77
CIRBP-220ENST00000588917 HEATR6Q6AI08 1181 aaKnown RBP19.86■□□□□ 0.77
CIRBP-220ENST00000588917 ANO7Q6IWH7 933 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 DARS2Q6PI48 645 aaKnown RBP19.86■□□□□ 0.77
CIRBP-220ENST00000588917 DPY19L3Q6ZPD9 716 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 LONP2Q86WA8 852 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 MAML2Q8IZL2 1156 aaPredicted RBP19.86■□□□□ 0.77
CIRBP-220ENST00000588917 ACTRT1Q8TDG2 376 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 HTR3CQ8WXA8 447 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 IL12RB2Q99665 862 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 OSBPL1AQ9BXW6 950 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 TM6SF2Q9BZW4 377 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 POLR1EQ9GZS1 481 aaKnown RBP19.86■□□□□ 0.77
CIRBP-220ENST00000588917 MKRN2Q9H000 416 aaKnown RBP19.86■□□□□ 0.77
CIRBP-220ENST00000588917 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.86■□□□□ 0.77
CIRBP-220ENST00000588917 PPM1HQ9ULR3 514 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 NCKAP1Q9Y2A7 1128 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 R4GN57 208 aa19.86■□□□□ 0.77
CIRBP-220ENST00000588917 ZNF292O60281 2723 aa19.85■□□□□ 0.77
CIRBP-220ENST00000588917 BCLAF3A2AJT9 711 aaKnown RBP19.85■□□□□ 0.77
CIRBP-220ENST00000588917 AXIN1O15169 862 aa19.85■□□□□ 0.77
CIRBP-220ENST00000588917 STK10O94804 968 aaKnown RBP19.85■□□□□ 0.77
CIRBP-220ENST00000588917 IL1BP01584 269 aa19.85■□□□□ 0.77
CIRBP-220ENST00000588917 C5AR1P21730 350 aa19.85■□□□□ 0.77
CIRBP-220ENST00000588917 STIP1P31948 543 aaKnown RBP19.85■□□□□ 0.77
CIRBP-220ENST00000588917 AP1S1P61966 158 aa19.85■□□□□ 0.77
CIRBP-220ENST00000588917 RPS14P62263 151 aaKnown RBP19.85■□□□□ 0.77
CIRBP-220ENST00000588917 ITKQ08881 620 aa19.85■□□□□ 0.77
CIRBP-220ENST00000588917 CCNG2Q16589 344 aa19.85■□□□□ 0.77
CIRBP-220ENST00000588917 TTC31Q49AM3 519 aaPredicted RBP19.85■□□□□ 0.77
CIRBP-220ENST00000588917 USP39Q53GS9 565 aaKnown RBP19.85■□□□□ 0.77
CIRBP-220ENST00000588917 TEX44Q53QW1 395 aa19.85■□□□□ 0.77
CIRBP-220ENST00000588917 ZC3H14Q6PJT7 736 aaKnown RBP19.85■□□□□ 0.77
CIRBP-220ENST00000588917 SRLQ86TD4 932 aa19.85■□□□□ 0.77
CIRBP-220ENST00000588917 MMAAQ8IVH4 418 aaKnown RBP19.85■□□□□ 0.77
CIRBP-220ENST00000588917 PPP1R16AQ96I34 528 aa19.85■□□□□ 0.77
CIRBP-220ENST00000588917 QKIQ96PU8 341 aaKnown RBP eCLIP19.85■□□□□ 0.77
CIRBP-220ENST00000588917 TUBGCP5Q96RT8 1024 aa19.85■□□□□ 0.77
CIRBP-220ENST00000588917 ITM2CQ9NQX7 267 aa19.85■□□□□ 0.77
CIRBP-220ENST00000588917 LHX3Q9UBR4 397 aa19.85■□□□□ 0.77
CIRBP-220ENST00000588917 RNF14Q9UBS8 474 aa19.85■□□□□ 0.77
CIRBP-220ENST00000588917 TRHDEQ9UKU6 1024 aa19.85■□□□□ 0.77
CIRBP-220ENST00000588917 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.84■□□□□ 0.77
CIRBP-220ENST00000588917 CFAP69A5D8W1 941 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 KCNK1O00180 336 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 PGRMC1O00264 195 aaKnown RBP19.84■□□□□ 0.77
CIRBP-220ENST00000588917 KRIT1O00522 736 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 SP9P0CG40 484 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 NDUFV2P19404 249 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 SLC8A1P32418 973 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 CNR2P34972 360 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 ID4P47928 161 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 SCNN1BP51168 640 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 CST6Q15828 149 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 ARSIQ5FYB1 569 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 NYAP1Q6ZVC0 841 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 KBTBD6Q86V97 674 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 WDR5BQ86VZ2 330 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 MDGA1Q8NFP4 955 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 HCAR2Q8TDS4 363 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 NUDCD1Q96RS6 583 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 MGME1Q9BQP7 344 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 NT5MQ9NPB1 228 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 DYRK4Q9NR20 520 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 SEPT10Q9P0V9 454 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 ATP8A1Q9Y2Q0 1164 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 NUP205Q92621 2012 aa19.84■□□□□ 0.77
CIRBP-220ENST00000588917 MUC22E2RYF6 1773 aaPredicted RBP19.83■□□□□ 0.77
CIRBP-220ENST00000588917 TCRBV7S2A1N4TA0A589 114 aa19.83■□□□□ 0.77
CIRBP-220ENST00000588917 TDGF1P13385 188 aa19.83■□□□□ 0.77
CIRBP-220ENST00000588917 OXTRP30559 389 aa19.83■□□□□ 0.77
CIRBP-220ENST00000588917 ATXN7L2Q5T6C5 722 aaPredicted RBP19.83■□□□□ 0.77
CIRBP-220ENST00000588917 DRICH1Q6PGQ1 229 aaPredicted RBP19.83■□□□□ 0.77
CIRBP-220ENST00000588917 TSSK4Q6SA08 328 aa19.83■□□□□ 0.77
CIRBP-220ENST00000588917 KIAA1324Q6UXG2 1013 aaKnown RBP19.83■□□□□ 0.77
CIRBP-220ENST00000588917 GDPD4Q6W3E5 623 aa19.83■□□□□ 0.77
CIRBP-220ENST00000588917 SYT10Q6XYQ8 523 aa19.83■□□□□ 0.77
CIRBP-220ENST00000588917 USP30Q70CQ3 517 aa19.83■□□□□ 0.77
CIRBP-220ENST00000588917 ERMP1Q7Z2K6 904 aa19.83■□□□□ 0.77
CIRBP-220ENST00000588917 ADAT2Q7Z6V5 191 aaKnown RBP19.83■□□□□ 0.77
CIRBP-220ENST00000588917 SLC35B2Q8TB61 432 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms